RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ZNF365Q70YC5 407 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 NSUN4Q96CB9 384 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 TOX2Q96NM4 488 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 PI4KBQ9UBF8 816 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 TRANK1O15050 2925 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 PI4K2BG5E9Z4 385 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 SMIM22K7EJ46 135 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 ARHGAP33O14559 1287 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 MAP4K4O95819 1239 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 CSF2RAP15509 400 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 PPIGQ13427 754 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 RAB30Q15771 203 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 ERICH6Q7L0X2 663 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 TEX11Q8IYF3 940 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 SH3RF3Q8TEJ3 882 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 MOV10L1Q9BXT6 1211 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 SIL1Q9H173 461 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 XPNPEP3Q9NQH7 507 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 MSRAQ9UJ68 235 aa9.53□□□□□ -0.88
SMARCE1-217ENST00000580654 PRRC2BQ5JSZ5 2229 aaKnown RBP9.52□□□□□ -0.88
SMARCE1-217ENST00000580654 PARP14Q460N5 1801 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 TK2O00142 265 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 RFXAPO00287 272 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 CIAO1O76071 339 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 MYOGP15173 224 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 TAL1P17542 331 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 VCAM1P19320 739 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 NHLH1Q02575 133 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 SPTY2D1Q68D10 685 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 PI16Q6UXB8 463 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 HERVK_113Q902F9 699 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 MAML3Q96JK9 1138 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 CFAP54Q96N23 3096 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 SLC28A3Q9HAS3 691 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 GINM1Q9NU53 330 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 CEP126Q9P2H0 1117 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 MYO5AQ9Y4I1 1855 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 MTCH2Q9Y6C9 303 aa9.52□□□□□ -0.89
SMARCE1-217ENST00000580654 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 MYH1P12882 1939 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 STRNO43815 780 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 GH2P01242 217 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 RARBP10826 455 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 ERCC3P19447 782 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 POU3F3P20264 500 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 ACLYP53396 1101 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 RABGGTBP53611 331 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 TIMM10P62072 90 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 KRT40Q6A162 431 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 CCSAPQ6IQ19 270 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 PSRC1Q6PGN9 363 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 RNF180Q86T96 592 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 ACER1Q8TDN7 264 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 DHX36Q9H2U1 1008 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 FLT1P17948 1338 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 ZNF521Q96K83 1311 aa9.51□□□□□ -0.89
SMARCE1-217ENST00000580654 USP34Q70CQ2 3546 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 PRR33A8MZF0 331 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 HRO43593 1189 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 LDHCP07864 332 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 ZNF865P0CJ78 1059 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 CDK7P50613 346 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 FOXK2Q01167 660 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 DDX10Q13206 875 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 MAPKAPK5Q8IW41 473 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 KLHDC9Q8NEP7 349 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 SPATC1LQ9H0A9 340 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 KIAA1683Q9H0B3 1180 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 RPAP3Q9H6T3 665 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 HMG20BQ9P0W2 317 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 PALD1Q9ULE6 856 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 PA2G4Q9UQ80 394 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-217ENST00000580654 COL4A4P53420 1690 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 MYADML2A6NDP7 307 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 EPOPA6NHQ4 379 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 GSTO1P78417 241 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 CCDC174Q6PII3 467 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 ADGRA1Q86SQ6 560 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 CRACR2BQ8N4Y2 399 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms