RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CANXP27824 592 aaKnown RBP4.69□□□□□ -1.66
KPNB1-208ENST00000580019 ATXN1P54253 815 aaKnown RBP4.69□□□□□ -1.66
KPNB1-208ENST00000580019 INHBEP58166 350 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 ERVFRD-1P60508 538 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 TEKQ02763 1124 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 SCARA3Q6AZY7 606 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 B4GALNT3Q6L9W6 998 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 FAM177A1Q8N128 213 aaPredicted RBP4.69□□□□□ -1.66
KPNB1-208ENST00000580019 KISS1RQ969F8 398 aaPredicted RBP4.69□□□□□ -1.66
KPNB1-208ENST00000580019 CCDC74AQ96AQ1 378 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 G6PC3Q9BUM1 346 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 LNPKQ9C0E8 428 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 PPP4R2Q9NY27 417 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 TSC22D4Q9Y3Q8 395 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 SAMM50Q9Y512 469 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 NOBOXO60393 691 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 NCKAP1LP55160 1127 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 GJA9P57773 515 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 ETF1P62495 437 aaKnown RBP4.68□□□□□ -1.66
KPNB1-208ENST00000580019 SRPK2P78362 688 aaKnown RBP4.68□□□□□ -1.66
KPNB1-208ENST00000580019 VWA3BQ502W6 1294 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
KPNB1-208ENST00000580019 ADGRG2Q8IZP9 1017 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 KLHL14Q9P2G3 628 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 SUSD2Q9UGT4 822 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 HS3ST3A1Q9Y663 406 aa4.68□□□□□ -1.66
KPNB1-208ENST00000580019 A0A1B0GTL3 188 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 USP2O75604 605 aaPredicted RBP4.67□□□□□ -1.66
KPNB1-208ENST00000580019 FBLN1P23142 703 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 LIMS1P48059 325 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 TGFB2P61812 414 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 PURAQ00577 322 aaKnown RBP4.67□□□□□ -1.66
KPNB1-208ENST00000580019 ORC1Q13415 861 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 IGSF5Q9NSI5 407 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 ING1Q9UK53 422 aaPredicted RBP4.67□□□□□ -1.66
KPNB1-208ENST00000580019 KCNH3Q9ULD8 1083 aa4.67□□□□□ -1.66
KPNB1-208ENST00000580019 GNEQ9Y223 722 aaKnown RBP4.67□□□□□ -1.66
KPNB1-208ENST00000580019 UNCXA6NJT0 531 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 PFKLP17858 780 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 BMP6P22004 513 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 IGFBP6P24592 240 aaPredicted RBP4.66□□□□□ -1.66
KPNB1-208ENST00000580019 KIR2DL1P43626 348 aaPredicted RBP4.66□□□□□ -1.66
KPNB1-208ENST00000580019 KIR2DL2P43627 348 aaPredicted RBP4.66□□□□□ -1.66
KPNB1-208ENST00000580019 SF3B2Q13435 895 aaKnown RBP4.66□□□□□ -1.66
KPNB1-208ENST00000580019 INPP5AQ14642 412 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 LRRC14Q15048 493 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 LLGL2Q6P1M3 1020 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 LRFN4Q6PJG9 635 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 HDXQ7Z353 690 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 DTWD2Q8NBA8 298 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 ZNF281Q9Y2X9 895 aa4.66□□□□□ -1.66
KPNB1-208ENST00000580019 SH3D21A4FU49 640 aa4.65□□□□□ -1.67
KPNB1-208ENST00000580019 PLATP00750 562 aa4.65□□□□□ -1.67
KPNB1-208ENST00000580019 RGS19P49795 217 aa4.65□□□□□ -1.67
KPNB1-208ENST00000580019 CEP128Q6ZU80 1094 aa4.65□□□□□ -1.67
KPNB1-208ENST00000580019 AKAP2Q9Y2D5 859 aa4.65□□□□□ -1.67
KPNB1-208ENST00000580019 CARNS1A5YM72 827 aa4.64□□□□□ -1.67
KPNB1-208ENST00000580019 AMHP03971 560 aa4.64□□□□□ -1.67
KPNB1-208ENST00000580019 MSL3P1P0C860 447 aa4.64□□□□□ -1.67
KPNB1-208ENST00000580019 RAB3GAP1Q15042 981 aa4.64□□□□□ -1.67
KPNB1-208ENST00000580019 SAPCD2Q86UD0 394 aa4.64□□□□□ -1.67
KPNB1-208ENST00000580019 FNIP1Q8TF40 1166 aa4.64□□□□□ -1.67
KPNB1-208ENST00000580019 MRRFQ96E11 262 aaKnown RBP4.64□□□□□ -1.67
KPNB1-208ENST00000580019 ARL4AP40617 200 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 FKBP4Q02790 459 aaKnown RBP eCLIP4.63□□□□□ -1.67
KPNB1-208ENST00000580019 CDSNQ15517 529 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 DNAJB8Q8NHS0 232 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 PLPPR2Q96GM1 343 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 MAP6Q96JE9 813 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 DRC1Q96MC2 740 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 ST6GALNAC2Q9UJ37 374 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 ZMYM5Q9UJ78 669 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 IRS2Q9Y4H2 1338 aa4.63□□□□□ -1.67
KPNB1-208ENST00000580019 TMEM88BA6NKF7 163 aa4.62□□□□□ -1.67
KPNB1-208ENST00000580019 PPM1GO15355 546 aaPredicted RBP4.62□□□□□ -1.67
KPNB1-208ENST00000580019 TBC1D10BQ4KMP7 808 aaPredicted RBP4.62□□□□□ -1.67
KPNB1-208ENST00000580019 CDK5RAP1Q96SZ6 601 aaKnown RBP4.62□□□□□ -1.67
KPNB1-208ENST00000580019 TACC3Q9Y6A5 838 aa4.62□□□□□ -1.67
KPNB1-208ENST00000580019 PMF1-BGLAPU3KQ54 211 aa4.62□□□□□ -1.67
KPNB1-208ENST00000580019 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 RPL10P27635 214 aaKnown RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 LAPTM5Q13571 262 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 FHL2Q14192 279 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 CBX2Q14781 532 aaPredicted RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 TARBP2Q15633 366 aaKnown RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 CARFQ8N187 725 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 EPS8L3Q8TE67 593 aaKnown RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 ZNF526Q8TF50 670 aaPredicted RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 CHMP4AQ9BY43 222 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 PRDM14Q9GZV8 571 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 KIAA1522Q9P206 1035 aaPredicted RBP4.61□□□□□ -1.67
KPNB1-208ENST00000580019 CEP131Q9UPN4 1083 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 SNCAIPQ9Y6H5 919 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 LTBP3Q9NS15 1303 aa4.61□□□□□ -1.67
KPNB1-208ENST00000580019 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
KPNB1-208ENST00000580019 NUDT19A8MXV4 375 aa4.6□□□□□ -1.67
KPNB1-208ENST00000580019 EIF1AYO14602 144 aaKnown RBP4.6□□□□□ -1.67
KPNB1-208ENST00000580019 GRK4P32298 578 aa4.6□□□□□ -1.67
KPNB1-208ENST00000580019 TXNDC2Q86VQ3 553 aa4.6□□□□□ -1.67
KPNB1-208ENST00000580019 MRPL41Q8IXM3 137 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms