RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 RFC2P35250 354 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 LTBRP36941 435 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 RPAINQ86UA6 219 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 ZSCAN29Q8IWY8 852 aaPredicted RBP7.72□□□□□ -1.17
CCDC178-209ENST00000579947 SHCBP1Q8NEM2 672 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 PLEKHF1Q96S99 279 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 CFAP47Q6ZTR5 3102 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 TPRP12270 2363 aaKnown RBP7.72□□□□□ -1.17
CCDC178-209ENST00000579947 LCHNA4D1U4 455 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 PER1O15534 1290 aaPredicted RBP7.72□□□□□ -1.17
CCDC178-209ENST00000579947 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
CCDC178-209ENST00000579947 ZNF865P0CJ78 1059 aaPredicted RBP7.72□□□□□ -1.17
CCDC178-209ENST00000579947 ABRAQ8N0Z2 381 aa7.72□□□□□ -1.17
CCDC178-209ENST00000579947 PHAXQ9H814 394 aaKnown RBP7.72□□□□□ -1.17
CCDC178-209ENST00000579947 SMCHD1A6NHR9 2005 aa7.71□□□□□ -1.17
CCDC178-209ENST00000579947 PDGFBP01127 241 aaPredicted RBP7.71□□□□□ -1.18
CCDC178-209ENST00000579947 CASP7P55210 303 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 GCKRQ14397 625 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 UPF3AQ9H1J1 476 aaKnown RBP7.71□□□□□ -1.18
CCDC178-209ENST00000579947 BTBD7Q9P203 1132 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 CLSPNQ9HAW4 1339 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 COL4A3Q01955 1670 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 BAIAP3O94812 1187 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 TCEAL5Q5H9L2 206 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 BANK1Q8NDB2 785 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 KCNG4Q8TDN1 519 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 RTKNQ9BST9 563 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 PCDHGC5Q9Y5F6 944 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 ZNF292O60281 2723 aa7.71□□□□□ -1.18
CCDC178-209ENST00000579947 RIF1Q5UIP0 2472 aaKnown RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 DDX58O95786 925 aaKnown RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 ASGR1P07306 291 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 ICAM3P32942 547 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 RRP1BQ14684 758 aaKnown RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 PTPN21Q16825 1174 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L2Q6R6M4 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 UBE3BQ7Z3V4 1068 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 HAUS7Q99871 368 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 NSUN3Q9H649 340 aaKnown RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 CLDND1Q9NY35 253 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 ATG2AQ2TAZ0 1938 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 MYADML2A6NDP7 307 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 PLIN1O60240 522 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 IFIT5Q13325 482 aaKnown RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 FBXO22Q8NEZ5 403 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 LENG1Q96BZ8 264 aaPredicted RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 SCLYQ96I15 445 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 C12orf42Q96LP6 360 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 IQSEC3Q9UPP2 1182 aaPredicted RBP7.7□□□□□ -1.18
CCDC178-209ENST00000579947 SCN5AQ14524 2016 aa7.7□□□□□ -1.18
CCDC178-209ENST00000579947 LINC01553A4QN01 128 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 CHL1O00533 1208 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 COL9A3Q14050 684 aaPredicted RBP7.69□□□□□ -1.18
CCDC178-209ENST00000579947 ASTLQ6HA08 431 aaPredicted RBP7.69□□□□□ -1.18
CCDC178-209ENST00000579947 RUBCNQ92622 972 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 EMILIN3Q9NT22 766 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 MYO15AQ9UKN7 3530 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 NEURL1BA8MQ27 555 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 NPM3O75607 178 aaKnown RBP7.69□□□□□ -1.18
CCDC178-209ENST00000579947 PROS1P07225 676 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 NKX3-2P78367 333 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 DIXDC1Q155Q3 683 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 VPS37DQ86XT2 251 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 CD207Q9UJ71 328 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 MAP3K2Q9Y2U5 619 aa7.69□□□□□ -1.18
CCDC178-209ENST00000579947 DUSP11O75319 330 aaKnown RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 FRAT2O75474 233 aaPredicted RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 TAL1P17542 331 aaPredicted RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 VTI1AQ96AJ9 217 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 FASNP49327 2511 aaKnown RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 DNAH14Q0VDD8 3507 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 PRR5-ARHGAP8B1AHC4 643 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 ARHGAP8P85298 464 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 NCBP3Q53F19 620 aaKnown RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 CATSPERGQ6ZRH7 1159 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 EP400NLQ6ZTU2 488 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 WDR66Q8TBY9 1149 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 MOV10L1Q9BXT6 1211 aaKnown RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 DDX4Q9NQI0 724 aaKnown RBP7.68□□□□□ -1.18
CCDC178-209ENST00000579947 FAM184BQ9ULE4 1060 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 TIMELESSQ9UNS1 1208 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 FAM196BA6NMK8 535 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 EYA4O95677 639 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 GJA9P57773 515 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 CAVIN4Q5BKX8 364 aa7.68□□□□□ -1.18
CCDC178-209ENST00000579947 LRSAM1Q6UWE0 723 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms