RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
MKS1-207ENST00000578789 NMT2O60551 498 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 MAPK4P31152 587 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
MKS1-207ENST00000578789 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 PORCNQ9H237 461 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 ADAMTS5Q9UNA0 930 aa17.09■□□□□ 0.33
MKS1-207ENST00000578789 FLT3LGP49771 235 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 CCNA1P78396 465 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 PTH1RQ03431 593 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 RAET1EQ8TD07 263 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 ESR2Q92731 530 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 ZNF333Q96JL9 665 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
MKS1-207ENST00000578789 RAD21O60216 631 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 SLFN13Q68D06 897 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 SLAIN1Q8ND83 568 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 SOCS4Q8WXH5 440 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 GMCL1Q96IK5 515 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
MKS1-207ENST00000578789 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 FBXO28Q9NVF7 368 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 GJD2Q9UKL4 321 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
MKS1-207ENST00000578789 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
MKS1-207ENST00000578789 GRK4P32298 578 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 GPR142Q7Z601 462 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 SHCBP1Q8NEM2 672 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 REPS2Q8NFH8 660 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 PXYLP1Q8TE99 480 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 SPATC1LQ9H0A9 340 aa17.06■□□□□ 0.32
MKS1-207ENST00000578789 VWA5AO00534 786 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 BMP3P12645 472 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 MORN1Q5T089 497 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 PLEKHH3Q7Z736 793 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 SH3TC2Q8TF17 1288 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 USP6NLQ92738 828 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 MOV10L1Q9BXT6 1211 aaKnown RBP17.05■□□□□ 0.32
MKS1-207ENST00000578789 CNNM2Q9H8M5 875 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 FEM1BQ9UK73 627 aa17.05■□□□□ 0.32
MKS1-207ENST00000578789 B4E1Z4 1266 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 ADCY3O60266 1144 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 KDM4AO75164 1064 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 CYP21A2P08686 494 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
MKS1-207ENST00000578789 RGS19P49795 217 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 TMEM132BQ14DG7 1078 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 CCAR1Q8IX12 1150 aaKnown RBP17.04■□□□□ 0.32
MKS1-207ENST00000578789 TTC14Q96N46 770 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 NUDT12Q9BQG2 462 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 KRT23Q9C075 422 aa17.04■□□□□ 0.32
MKS1-207ENST00000578789 LSG1Q9H089 658 aaKnown RBP17.04■□□□□ 0.32
MKS1-207ENST00000578789 PLA2G6O60733 806 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 CDC45O75419 566 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 SLC1A4P43007 532 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 SOX10P56693 466 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 GRB14Q14449 540 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
MKS1-207ENST00000578789 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
MKS1-207ENST00000578789 ZNF214Q9UL59 606 aaPredicted RBP17.03■□□□□ 0.32
MKS1-207ENST00000578789 RBM8AQ9Y5S9 174 aaKnown RBP17.03■□□□□ 0.32
MKS1-207ENST00000578789 SLC15A5A6NIM6 579 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 SLC25A27O95847 323 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
MKS1-207ENST00000578789 ERCC3P19447 782 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 PTPREP23469 700 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 MCCP23508 829 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 STAT2P52630 851 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
MKS1-207ENST00000578789 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 RASGRP2Q7LDG7 609 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 RIOX2Q8IUF8 465 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 ANKS1AQ92625 1134 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 MROH8Q9H579 483 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
MKS1-207ENST00000578789 ZSWIM5Q9P217 1185 aa17.02■□□□□ 0.32
MKS1-207ENST00000578789 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 ATP2A1O14983 1001 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 FDX1P10109 184 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 ELNP15502 786 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 COPB2P35606 906 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 RGS2P41220 211 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 UBXN2AP68543 259 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 MAP2K5Q13163 448 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 PLS1Q14651 629 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
MKS1-207ENST00000578789 APBA2Q99767 749 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms