RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 A0A0G2JMZ2 1700 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 INHAP05111 366 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 ELNP15502 786 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 CYP2B6P20813 491 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 NT5C2P49902 561 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 SLFN13Q68D06 897 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 TRMT44Q8IYL2 757 aaKnown RBP13.73□□□□□ -0.21
GGA3-204ENST00000578208 GMCL1P1Q8NEA9 526 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 ESR2Q92731 530 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
GGA3-204ENST00000578208 SLF1Q9BQI6 1058 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 SPATC1LQ9H0A9 340 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 PPP1R9AQ9ULJ8 1098 aa13.73□□□□□ -0.21
GGA3-204ENST00000578208 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 HMGCRP04035 888 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 FGRP09769 529 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 CCL5P13501 91 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
GGA3-204ENST00000578208 CHMLP26374 656 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 IKQ13123 557 aaPredicted RBP13.72□□□□□ -0.21
GGA3-204ENST00000578208 TBC1D10CQ8IV04 446 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 APBA2Q99767 749 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 MOV10L1Q9BXT6 1211 aaKnown RBP13.72□□□□□ -0.21
GGA3-204ENST00000578208 MROH8Q9H579 483 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 FBXO28Q9NVF7 368 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 GJD2Q9UKL4 321 aa13.72□□□□□ -0.21
GGA3-204ENST00000578208 LAMA4Q16363 1823 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.21
GGA3-204ENST00000578208 SLC15A5A6NIM6 579 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 ZBED4O75132 1171 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 SLC25A27O95847 323 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 BMP3P12645 472 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 PTPREP23469 700 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 COPB2P35606 906 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 SLC1A4P43007 532 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 MTFR1Q15390 333 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 MORN1Q5T089 497 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 POTEEQ6S8J3 1075 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 NCAPG2Q86XI2 1143 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 RNF208Q9H0X6 261 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
GGA3-204ENST00000578208 NEDD4P46934 1319 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 VWA5AO00534 786 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 STRNO43815 780 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 NMT2O60551 498 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 XRCC5P13010 732 aaKnown RBP13.7□□□□□ -0.22
GGA3-204ENST00000578208 ERCC3P19447 782 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 MAP2K5Q13163 448 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 TMEM132BQ14DG7 1078 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 CCDC178Q5BJE1 867 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 FAM160B2Q86V87 743 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
GGA3-204ENST00000578208 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 GMCL1Q96IK5 515 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 KRT23Q9C075 422 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 IL17RBQ9NRM6 502 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 TCP11L1Q9NUJ3 509 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 SLC5A4Q9NY91 659 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 TACC3Q9Y6A5 838 aa13.7□□□□□ -0.22
GGA3-204ENST00000578208 RLFQ13129 1914 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 FDX1P10109 184 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
GGA3-204ENST00000578208 STAT3P40763 770 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 STAT2P52630 851 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 GRB14Q14449 540 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 DPP9Q86TI2 863 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 RIOX2Q8IUF8 465 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 CHURC1Q8WUH1 139 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 ADAMTS5Q9UNA0 930 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
GGA3-204ENST00000578208 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
GGA3-204ENST00000578208 SGSM2O43147 1006 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 KDM4AO75164 1064 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 GJB1P08034 283 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 FCER1AP12319 257 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 EN2P19622 333 aaPredicted RBP13.68□□□□□ -0.22
GGA3-204ENST00000578208 MCCP23508 829 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 TRDNQ13061 729 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 MFSD14CQ5VZR4 134 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 SNRNP48Q6IEG0 339 aaKnown RBP13.68□□□□□ -0.22
GGA3-204ENST00000578208 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 DCAF4Q8WV16 495 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 TRIB2Q92519 343 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 USP6NLQ92738 828 aa13.68□□□□□ -0.22
GGA3-204ENST00000578208 TTC14Q96N46 770 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms