RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 CHRDL2Q6WN34 429 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 TEX11Q8IYF3 940 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 RPUSD2Q8IZ73 545 aaKnown RBP7.88□□□□□ -1.15
KRT39-203ENST00000578078 BICD2Q8TD16 824 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 CCDC85AQ96PX6 553 aaPredicted RBP7.88□□□□□ -1.15
KRT39-203ENST00000578078 GBP3Q9H0R5 595 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 BOLA2Q9H3K6 86 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 CBX8Q9HC52 389 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 GPR108Q9NPR9 543 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 DBNLQ9UJU6 430 aaKnown RBP7.88□□□□□ -1.15
KRT39-203ENST00000578078 PCDHGA11Q9Y5H2 935 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.88□□□□□ -1.15
KRT39-203ENST00000578078 TCHHQ07283 1943 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 ZNF831Q5JPB2 1677 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 CDHR2Q9BYE9 1310 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 ZNF609O15014 1411 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 COL5A3P25940 1745 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 A0A0G2JS52 829 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 EYA2O00167 538 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 POLR3GO15318 223 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 STX6O43752 255 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 ERLIN1O75477 346 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 NUDT7P0C024 238 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 GCFC2P16383 781 aaKnown RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 IL6STP40189 918 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 CCDC57Q2TAC2 916 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 GBP6Q6ZN66 633 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 ZBTB38Q8NAP3 1195 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 ERCC4Q92889 916 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 ALKBH8Q96BT7 664 aaKnown RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 FAM129BQ96TA1 746 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 PLA2G12BQ9BX93 195 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 SCAND2PQ9GZW5 306 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 IL25Q9H293 177 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 COLQQ9Y215 455 aaPredicted RBP7.87□□□□□ -1.15
KRT39-203ENST00000578078 PCDHGB7Q9Y5F8 929 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 MYH7P12883 1935 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 LAMB2P55268 1798 aa7.87□□□□□ -1.15
KRT39-203ENST00000578078 ERVV-1B6SEH8 477 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 GOLGA6L19H0YKK7 550 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 PES1O00541 588 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 IPO7O95373 1038 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 ZKSCAN1P17029 563 aaPredicted RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 PTPREP23469 700 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 ELF1P32519 619 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 ZNF165P49910 485 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 MNAT1P51948 309 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 NMIQ13287 307 aaPredicted RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 SART3Q15020 963 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 HDXQ7Z353 690 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 ATG9AQ7Z3C6 839 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 MAGEC3Q8TD91 643 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 CRELD1Q96HD1 420 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 NEUROD6Q96NK8 337 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 SETDB2Q96T68 719 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 SH3GL3Q99963 347 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 DBNDD2Q9BQY9 259 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 TMX4Q9H1E5 349 aaPredicted RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 VIPAS39Q9H9C1 493 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 VEZTQ9HBM0 779 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 SNX14Q9Y5W7 946 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 BCORQ6W2J9 1755 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 A0A1B0GUA9 196 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 CCDC69A6NI79 296 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 M0R2N6 131 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 CHUKO15111 745 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 GPR182O15218 404 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 DNAJC6O75061 913 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 CFHP08603 1231 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 RWDD2BP57060 319 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 KRT85P78386 507 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 ADCY2Q08462 1091 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 APOBRQ0VD83 1088 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 IFIT5Q13325 482 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 PLCB4Q15147 1175 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 Q3C1V9 767 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 RSRC2Q7L4I2 434 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 CCDC50Q8IVM0 306 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 PRPF38AQ8NAV1 312 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 TSEN2Q8NCE0 465 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 CTCFLQ8NI51 663 aaPredicted RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 TCP11Q8WWU5 503 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 GPKOWQ92917 476 aaPredicted RBP eCLIP7.86□□□□□ -1.15
KRT39-203ENST00000578078 FAXDC2Q96IV6 333 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 SLC4A9Q96Q91 983 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 HAUS7Q99871 368 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.86□□□□□ -1.15
KRT39-203ENST00000578078 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 NUCKS1Q9H1E3 243 aaKnown RBP7.86□□□□□ -1.15
KRT39-203ENST00000578078 TNMDQ9H2S6 317 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 AKAP2Q9Y2D5 859 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 ZBTB1Q9Y2K1 713 aa7.86□□□□□ -1.15
KRT39-203ENST00000578078 JCADQ9P266 1359 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 MED23Q9ULK4 1368 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 A0A0D9SFI3 127 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 ANKRD18BA2A2Z9 1011 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 UBAP1LF5GYI3 381 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms