RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CNNM2Q9H8M5 875 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 PAK6Q9NQU5 681 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
CRLF3-202ENST00000577725 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
CRLF3-202ENST00000577725 CETPP11597 493 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 CUL4AQ13619 759 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 TMEM67Q5HYA8 995 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
CRLF3-202ENST00000577725 KLF18A0A0U1RQI7 1052 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
CRLF3-202ENST00000577725 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 BTBD19C9JJ37 291 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 ORC4O43929 436 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 NMT2O60551 498 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 INHAP05111 366 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 FGRP09769 529 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 CDK8P49336 464 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 PDE4BQ07343 736 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 ESR2Q92731 530 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 ZSCAN31Q96LW9 406 aaPredicted RBP11.8□□□□□ -0.52
CRLF3-202ENST00000577725 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 LY9Q9HBG7 655 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 MYH8P13535 1937 aa11.8□□□□□ -0.52
CRLF3-202ENST00000577725 ADCY3O60266 1144 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 RASA1P20936 1047 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 CCT2P78371 535 aaKnown RBP11.79□□□□□ -0.52
CRLF3-202ENST00000577725 NFXL1Q6ZNB6 911 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
CRLF3-202ENST00000577725 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
CRLF3-202ENST00000577725 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 IGDCC4Q8TDY8 1250 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 MYL10Q9BUA6 226 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 MKNK2Q9HBH9 465 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 NCOA5Q9HCD5 579 aaKnown RBP11.79□□□□□ -0.52
CRLF3-202ENST00000577725 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
CRLF3-202ENST00000577725 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
CRLF3-202ENST00000577725 ALPK3Q96L96 1907 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 TSPY2A6NKD2 308 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 GOLGA8BA8MQT2 603 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 MYO1BO43795 1136 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 PFKFB2O60825 505 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 RXRAP19793 462 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 FCGRTP55899 365 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
CRLF3-202ENST00000577725 TFAP4Q01664 338 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 SCRN1Q12765 414 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 VGLL4Q14135 290 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 WTAPQ15007 396 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 ALYREFQ86V81 257 aaKnown RBP11.78□□□□□ -0.52
CRLF3-202ENST00000577725 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 PXYLP1Q8TE99 480 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 UBAC1Q9BSL1 405 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 C11orf49Q9H6J7 331 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 CSADQ9Y600 493 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 TNKSO95271 1327 aa11.78□□□□□ -0.52
CRLF3-202ENST00000577725 JAK2O60674 1132 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ENTPD3O75355 529 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ELNP15502 786 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 PDIA3P30101 505 aaKnown RBP11.77□□□□□ -0.53
CRLF3-202ENST00000577725 GABPAQ06546 454 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 SEC23AQ15436 765 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
CRLF3-202ENST00000577725 CCDC144CPQ8IYA2 1237 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ZNF444Q8N0Y2 327 aaPredicted RBP11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ENAHQ8N8S7 591 aaPredicted RBP11.77□□□□□ -0.53
CRLF3-202ENST00000577725 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
CRLF3-202ENST00000577725 GABRQQ9UN88 632 aa11.77□□□□□ -0.53
CRLF3-202ENST00000577725 ERICH2A1L162 156 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 SPDYE5A6NIY4 337 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
CRLF3-202ENST00000577725 AKR1B1P15121 316 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 SHMT1P34896 483 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 DDIT3P35638 169 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 FOSBP53539 338 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 SNAPC2Q13487 334 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 NBR1Q14596 966 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 RASA3Q14644 834 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 SART3Q15020 963 aaKnown RBP11.76□□□□□ -0.53
CRLF3-202ENST00000577725 MICU3Q86XE3 530 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms