RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TOX2Q96NM4 488 aa16.14■□□□□ 0.17
COPS3-214ENST00000577246 TINF2Q9BSI4 451 aa16.14■□□□□ 0.17
COPS3-214ENST00000577246 TSEN34Q9BSV6 310 aaKnown RBP16.14■□□□□ 0.17
COPS3-214ENST00000577246 C1orf115Q9H7X2 142 aa16.14■□□□□ 0.17
COPS3-214ENST00000577246 DCP1AQ9NPI6 582 aaPredicted RBP16.14■□□□□ 0.17
COPS3-214ENST00000577246 TMEM39AQ9NV64 488 aa16.14■□□□□ 0.17
COPS3-214ENST00000577246 DNAJB2P25686 324 aa16.13■□□□□ 0.17
COPS3-214ENST00000577246 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
COPS3-214ENST00000577246 TJAP1Q5JTD0 557 aa16.13■□□□□ 0.17
COPS3-214ENST00000577246 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
COPS3-214ENST00000577246 ANKRD33Q7Z3H0 272 aa16.13■□□□□ 0.17
COPS3-214ENST00000577246 RIOX2Q8IUF8 465 aa16.13■□□□□ 0.17
COPS3-214ENST00000577246 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
COPS3-214ENST00000577246 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
COPS3-214ENST00000577246 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 PGK1P00558 417 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 GOPCQ9HD26 462 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 STARD7Q9NQZ5 370 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 ATP8A2Q9NTI2 1148 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 ZNF532Q9HCE3 1301 aa16.12■□□□□ 0.17
COPS3-214ENST00000577246 EYSQ5T1H1 3165 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 ITGB8P26012 769 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 STAT3P40763 770 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 ZNF792Q3KQV3 632 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 KIAA1755Q5JYT7 1200 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 SLC44A5Q8NCS7 719 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
COPS3-214ENST00000577246 ADAMTS5Q9UNA0 930 aa16.11■□□□□ 0.17
COPS3-214ENST00000577246 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 MYO5AQ9Y4I1 1855 aaKnown RBP16.1■□□□□ 0.17
COPS3-214ENST00000577246 PGK2P07205 417 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 AKR1B1P15121 316 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 EPHB4P54760 987 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 GRIN2CQ14957 1233 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 CLASRPQ8N2M8 674 aaKnown RBP16.1■□□□□ 0.17
COPS3-214ENST00000577246 LCORLQ8N3X6 602 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 GAS2L1Q99501 681 aaPredicted RBP16.1■□□□□ 0.17
COPS3-214ENST00000577246 ZNF576Q9H609 170 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 KANSL2Q9H9L4 492 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 FAM184BQ9ULE4 1060 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 EXOC6BQ9Y2D4 811 aa16.1■□□□□ 0.17
COPS3-214ENST00000577246 SPTBN5Q9NRC6 3674 aaKnown RBP16.1■□□□□ 0.17
COPS3-214ENST00000577246 CDH23Q9H251 3354 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 TNFRSF10AO00220 468 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 GOLIM4O00461 696 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 VWA5AO00534 786 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 ADAMTS4O75173 837 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 TIMP1P01033 207 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 ZNF865P0CJ78 1059 aaPredicted RBP16.09■□□□□ 0.17
COPS3-214ENST00000577246 CYP2D6P10635 497 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 ACLYP53396 1101 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 FAAP100Q0VG06 881 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 PPIGQ13427 754 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS3-214ENST00000577246 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 SIAH1Q8IUQ4 282 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 GLT1D1Q96MS3 346 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 DNAJC2Q99543 621 aaKnown RBP16.09■□□□□ 0.17
COPS3-214ENST00000577246 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS3-214ENST00000577246 SPC25Q9HBM1 224 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
COPS3-214ENST00000577246 TCRBV5S4A2TA0A5A2 114 aa16.08■□□□□ 0.16
COPS3-214ENST00000577246 IFIT2P09913 472 aaKnown RBP16.08■□□□□ 0.16
COPS3-214ENST00000577246 CLEC10AQ8IUN9 316 aa16.08■□□□□ 0.16
COPS3-214ENST00000577246 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
COPS3-214ENST00000577246 TEX13BQ9BXU2 312 aa16.08■□□□□ 0.16
COPS3-214ENST00000577246 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
COPS3-214ENST00000577246 ZNF214Q9UL59 606 aaPredicted RBP16.08■□□□□ 0.16
COPS3-214ENST00000577246 ELP1O95163 1332 aa16.08■□□□□ 0.16
COPS3-214ENST00000577246 SYNRGQ9UMZ2 1314 aa16.08■□□□□ 0.16
COPS3-214ENST00000577246 RAD21O60216 631 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 EEF2P13639 858 aaKnown RBP16.07■□□□□ 0.16
COPS3-214ENST00000577246 TAL1P17542 331 aaPredicted RBP16.07■□□□□ 0.16
COPS3-214ENST00000577246 CDK8P49336 464 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 EVX2Q03828 476 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 MFSD5Q6N075 450 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 CCDC129Q6ZRS4 1044 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 TMEM199Q8N511 208 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 ATXN2LQ8WWM7 1075 aaKnown RBP16.07■□□□□ 0.16
COPS3-214ENST00000577246 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 IL1RAPL2Q9NP60 686 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
COPS3-214ENST00000577246 DUSP11O75319 330 aaKnown RBP16.06■□□□□ 0.16
COPS3-214ENST00000577246 MBD4O95243 580 aa16.06■□□□□ 0.16
COPS3-214ENST00000577246 CST5P28325 142 aaPredicted RBP16.06■□□□□ 0.16
COPS3-214ENST00000577246 KCNA10Q16322 511 aa16.06■□□□□ 0.16
COPS3-214ENST00000577246 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
COPS3-214ENST00000577246 PSRC1Q6PGN9 363 aaPredicted RBP16.06■□□□□ 0.16
COPS3-214ENST00000577246 MAMDC4Q6UXC1 1216 aa16.06■□□□□ 0.16
COPS3-214ENST00000577246 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
COPS3-214ENST00000577246 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
COPS3-214ENST00000577246 MTIF3Q9H2K0 278 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms