RNA–Protein interactions for RNA: ENST00000576360.1

CHRNB1-208, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNB1, Length 1,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-208ENST00000576360 GNL2Q13823 731 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 TBC1D5Q92609 795 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 ALS2CR12Q96Q35 445 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 ANKRD31Q8N7Z5 1873 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 COL4A1P02462 1669 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 RNF40O75150 1001 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 ECEL1O95672 775 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 ATP5JP18859 108 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 ACTN3Q08043 901 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 POLA2Q14181 598 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 GCKRQ14397 625 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 KCNB1Q14721 858 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 CCDC38Q502W7 563 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
CHRNB1-208ENST00000576360 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 NTSR2O95665 410 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 PYGLP06737 847 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 SDSP20132 328 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 NOGQ13253 232 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 MTX1Q13505 466 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 EPHA10Q5JZY3 1008 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 CST9Q5W186 159 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 MTHFD1LQ6UB35 978 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 SRGAP1Q7Z6B7 1085 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 SAPCD2Q86UD0 394 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 B4GALNT2Q8NHY0 566 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 SCAND2PQ9GZW5 306 aaPredicted RBP12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 RMI1Q9H9A7 625 aa12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 ACTR5Q9H9F9 607 aaPredicted RBP12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 DDX60Q8IY21 1712 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-208ENST00000576360 MYO1FO00160 1098 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 UTYO14607 1347 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 EIF3HO15372 352 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 FMNL1O95466 1100 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 OATP04181 439 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 CASP7P55210 303 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 KRT85P78386 507 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 DEUP1Q05D60 604 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 DBN1Q16643 649 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 ARHGAP22Q7Z5H3 698 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 SUCLG2Q96I99 432 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 UBA5Q9GZZ9 404 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 PCDHGC5Q9Y5F6 944 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 TAF1P21675 1872 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 COL11A2P13942 1736 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 GOLGA6L7A0A1B0GV03 622 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 SRRM3A6NNA2 597 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 PYGBP11216 843 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 NPR1P16066 1061 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 MCM3P25205 808 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 TPP2P29144 1249 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 STX1AQ16623 288 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 CLEC4GQ6UXB4 293 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 CNBD1Q8NA66 436 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 TRIM58Q8NG06 486 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 DNAJC25Q9H1X3 360 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 ANKZF1Q9H8Y5 726 aa12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 CWC25Q9NXE8 425 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-208ENST00000576360 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
CHRNB1-208ENST00000576360 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-208ENST00000576360 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
CHRNB1-208ENST00000576360 RGL2O15211 777 aa12.1□□□□□ -0.47
CHRNB1-208ENST00000576360 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHRNB1-208ENST00000576360 SYF2O95926 243 aaKnown RBP12.1□□□□□ -0.47
CHRNB1-208ENST00000576360 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms