RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 SOCS4Q8WXH5 440 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 HELLSQ9NRZ9 838 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 RBPJLQ9UBG7 517 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 DBNLQ9UJU6 430 aaKnown RBP11.15□□□□□ -0.62
RFWD3-211ENST00000575397 NDUFB9Q9Y6M9 179 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 CDH23Q9H251 3354 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 MAST2Q6P0Q8 1798 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 SIPA1L1O43166 1804 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 FRMPD3Q5JV73 1810 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 A0A0D9SFI3 127 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 GJB2P29033 226 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 BACE1P56817 501 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 ERVK-9P63128 1117 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 ERVK-24P63145 666 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 MCMDC2Q4G0Z9 681 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 SPTY2D1Q68D10 685 aaPredicted RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 NOL8Q76FK4 1167 aaKnown RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 KBTBD3Q8NAB2 608 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 USP6NLQ92738 828 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 CDX2Q99626 313 aaPredicted RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 BOLA2Q9H3K6 86 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 MTMR6Q9Y217 621 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 KIF3AQ9Y496 699 aa11.14□□□□□ -0.63
RFWD3-211ENST00000575397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
RFWD3-211ENST00000575397 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 SYCE3A1L190 88 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 GDF11O95390 407 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 MAPK4P31152 587 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
RFWD3-211ENST00000575397 RGS2P41220 211 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 KRT85P78386 507 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 TFCP2Q12800 502 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 C9orf50Q5SZB4 431 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 MORN1Q5T089 497 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 CCDC83Q8IWF9 413 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
RFWD3-211ENST00000575397 TEX11Q8IYF3 940 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 MAFAQ8NHW3 353 aaPredicted RBP11.13□□□□□ -0.63
RFWD3-211ENST00000575397 MYLIPQ8WY64 445 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
RFWD3-211ENST00000575397 APBA2Q99767 749 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
RFWD3-211ENST00000575397 DSCC1Q9BVC3 393 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
RFWD3-211ENST00000575397 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 CCDC39Q9UFE4 941 aa11.13□□□□□ -0.63
RFWD3-211ENST00000575397 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 PDS5AQ29RF7 1337 aaKnown RBP11.12□□□□□ -0.63
RFWD3-211ENST00000575397 CNGA1P29973 690 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 TERF1P54274 439 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 SHHQ15465 462 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 PLEKHH3Q7Z736 793 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
RFWD3-211ENST00000575397 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
RFWD3-211ENST00000575397 NEUROD6Q96NK8 337 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
RFWD3-211ENST00000575397 PRDM6Q9NQX0 595 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 RAI14Q9P0K7 980 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 HERC5Q9UII4 1024 aaKnown RBP11.12□□□□□ -0.63
RFWD3-211ENST00000575397 NOL7Q9UMY1 257 aaKnown RBP11.12□□□□□ -0.63
RFWD3-211ENST00000575397 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
RFWD3-211ENST00000575397 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 ZBTB22O15209 634 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 LDHCP07864 332 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 ZFYP08048 801 aaPredicted RBP11.11□□□□□ -0.63
RFWD3-211ENST00000575397 ASNSP08243 561 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 RTP1P59025 263 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
RFWD3-211ENST00000575397 ME3Q16798 604 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 WDR78Q5VTH9 848 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 EDC3Q96F86 508 aaKnown RBP11.11□□□□□ -0.63
RFWD3-211ENST00000575397 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 AATFQ9NY61 560 aaKnown RBP eCLIP11.11□□□□□ -0.63
RFWD3-211ENST00000575397 PRKAG2Q9UGJ0 569 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
RFWD3-211ENST00000575397 C19orf81C9J6K1 198 aa11.1□□□□□ -0.63
RFWD3-211ENST00000575397 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
RFWD3-211ENST00000575397 CNMDO75829 334 aa11.1□□□□□ -0.63
RFWD3-211ENST00000575397 CYP2C19P33261 490 aa11.1□□□□□ -0.63
RFWD3-211ENST00000575397 GSTO1P78417 241 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms