RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 TRIM29Q14134 588 aa15.97■□□□□ 0.15
ERCC4-207ENST00000575156 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
ERCC4-207ENST00000575156 ASPRV1Q53RT3 343 aa15.97■□□□□ 0.15
ERCC4-207ENST00000575156 SPICE1Q8N0Z3 855 aa15.97■□□□□ 0.15
ERCC4-207ENST00000575156 ZKSCAN4Q969J2 545 aaPredicted RBP15.97■□□□□ 0.15
ERCC4-207ENST00000575156 DCPSQ96C86 337 aaKnown RBP15.97■□□□□ 0.15
ERCC4-207ENST00000575156 SPZ1Q9BXG8 430 aa15.97■□□□□ 0.15
ERCC4-207ENST00000575156 TFIP11Q9UBB9 837 aaKnown RBP15.97■□□□□ 0.15
ERCC4-207ENST00000575156 ISY1Q9ULR0 285 aaKnown RBP15.97■□□□□ 0.15
ERCC4-207ENST00000575156 ATP6V1DQ9Y5K8 247 aa15.97■□□□□ 0.15
ERCC4-207ENST00000575156 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.15
ERCC4-207ENST00000575156 ASNSP08243 561 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 ZYXQ15942 572 aaKnown RBP15.96■□□□□ 0.15
ERCC4-207ENST00000575156 EAPPQ56P03 285 aaPredicted RBP15.96■□□□□ 0.15
ERCC4-207ENST00000575156 USP50Q70EL3 339 aaPredicted RBP15.96■□□□□ 0.15
ERCC4-207ENST00000575156 HOMER1Q86YM7 354 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 LZTS2Q9BRK4 669 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 ZNF341Q9BYN7 854 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 FTOQ9C0B1 505 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC4-207ENST00000575156 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
ERCC4-207ENST00000575156 PPP2R3BQ9Y5P8 575 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 DDX11L8A8MPP1 907 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 ADAMTS3O15072 1205 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 FIBPO43427 364 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 MMP1P03956 469 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 SLC1A4P43007 532 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 DCAF15Q66K64 600 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 TYW1BQ6NUM6 668 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 KRT26Q7Z3Y9 468 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 GMCL1P1Q8NEA9 526 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 OXER1Q8TDS5 423 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 PIGSQ96S52 555 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 WRNIP1Q96S55 665 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 LMBRD1Q9NUN5 540 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 TMX2Q9Y320 296 aa15.96■□□□□ 0.15
ERCC4-207ENST00000575156 BTBD18B2RXH4 712 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 CTNND1O60716 968 aaKnown RBP15.95■□□□□ 0.14
ERCC4-207ENST00000575156 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 USP48Q86UV5 1035 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 RIOX1Q9H6W3 641 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 ZNF112Q9UJU3 913 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 MYH6P13533 1939 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 TCHHQ07283 1943 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 NR5A1Q13285 461 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 NPY5RQ15761 445 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 WWC2Q6AWC2 1192 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 DIS3L2Q8IYB7 885 aaKnown RBP15.95■□□□□ 0.14
ERCC4-207ENST00000575156 ADGRF4Q8IZF3 695 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 DCAF4Q8WV16 495 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 PHF20Q9BVI0 1012 aa15.95■□□□□ 0.14
ERCC4-207ENST00000575156 CEBPZQ03701 1054 aaKnown RBP15.94■□□□□ 0.14
ERCC4-207ENST00000575156 DGKZQ13574 1117 aa15.94■□□□□ 0.14
ERCC4-207ENST00000575156 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
ERCC4-207ENST00000575156 HEATR3Q7Z4Q2 680 aa15.94■□□□□ 0.14
ERCC4-207ENST00000575156 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
ERCC4-207ENST00000575156 GMCL1Q96IK5 515 aa15.94■□□□□ 0.14
ERCC4-207ENST00000575156 JMJD4Q9H9V9 463 aa15.94■□□□□ 0.14
ERCC4-207ENST00000575156 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 GOLGA6L22H0YM25 854 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
ERCC4-207ENST00000575156 SMARCA1P28370 1054 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 SUPT20HL1Q3ZLR7 823 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 RGS22Q8NE09 1264 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 RRP36Q96EU6 259 aaKnown RBP15.93■□□□□ 0.14
ERCC4-207ENST00000575156 IQCA1LA6NCM1 817 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 USP2O75604 605 aaPredicted RBP15.93■□□□□ 0.14
ERCC4-207ENST00000575156 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.14
ERCC4-207ENST00000575156 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
ERCC4-207ENST00000575156 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
ERCC4-207ENST00000575156 RBM27Q9P2N5 1060 aaKnown RBP15.93■□□□□ 0.14
ERCC4-207ENST00000575156 ATAD5Q96QE3 1844 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 STXBP3O00186 592 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
ERCC4-207ENST00000575156 BMP3P12645 472 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 SNAP25P60880 206 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 KRT85P78386 507 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 FAM83BQ5T0W9 1011 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 SCYL3Q8IZE3 742 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 ZC3H15Q8WU90 426 aaKnown RBP15.92■□□□□ 0.14
ERCC4-207ENST00000575156 HOOK2Q96ED9 719 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 VCPKMTQ9H867 229 aa15.92■□□□□ 0.14
ERCC4-207ENST00000575156 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
ERCC4-207ENST00000575156 FAM205CA6NFA0 338 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 TMEM232C9JQI7 657 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 XBP1P17861 261 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 NLRP5P59047 1200 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
ERCC4-207ENST00000575156 EARS2Q5JPH6 523 aaKnown RBP15.91■□□□□ 0.14
ERCC4-207ENST00000575156 MYSM1Q5VVJ2 828 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 CDCA5Q96FF9 252 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 BARHL2Q9NY43 387 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 SYNPO2Q9UMS6 1093 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 TRAK2O60296 914 aa15.91■□□□□ 0.14
ERCC4-207ENST00000575156 SAFBQ15424 915 aaKnown RBP eCLIP15.91■□□□□ 0.14
ERCC4-207ENST00000575156 MOB2Q70IA6 237 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms