RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 ADAMTS3O15072 1205 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 KRI1Q8N9T8 703 aaKnown RBP18.23■□□□□ 0.51
USP43-204ENST00000573955 EYA3Q99504 573 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 CPVLQ9H3G5 476 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 ROBO3Q96MS0 1386 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 WNT7AO00755 349 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 PLCG2P16885 1265 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
USP43-204ENST00000573955 ICE2Q659A1 982 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 KIF18AQ8NI77 898 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 KIAA1468Q9P260 1216 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 GAKO14976 1311 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 CDK5RAP2Q96SN8 1893 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 HMGB2P26583 209 aaKnown RBP18.22■□□□□ 0.51
USP43-204ENST00000573955 TRIM5Q9C035 493 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 ANO10Q9NW15 660 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
USP43-204ENST00000573955 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
USP43-204ENST00000573955 CEP83Q9Y592 693 aa18.22■□□□□ 0.51
USP43-204ENST00000573955 GOLGA6L19H0YKK7 550 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 SCG2P13521 617 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 KIF5BP33176 963 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 DPCR1Q3MIW9 517 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 RESP18Q5W5W9 173 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 TMX1Q9H3N1 280 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
USP43-204ENST00000573955 CUTAO60888 179 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 NLRP5P59047 1200 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 IQCB1Q15051 598 aa18.21■□□□□ 0.51
USP43-204ENST00000573955 CT47A1Q5JQC4 288 aaPredicted RBP18.21■□□□□ 0.51
USP43-204ENST00000573955 FAM163AQ96GL9 167 aaPredicted RBP18.21■□□□□ 0.51
USP43-204ENST00000573955 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.51
USP43-204ENST00000573955 BECN2A8MW95 431 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 PNOCQ13519 176 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 KCNH3Q9ULD8 1083 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 HPSEQ9Y251 543 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 H0YIN7 160 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 SLURP2P0DP57 97 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 NPY5RQ15761 445 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 LONRF3Q496Y0 759 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 AOPEPQ8N6M6 819 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 PDILTQ8N807 584 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 BRMS1Q9HCU9 246 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 FBXO2Q9UK22 296 aaPredicted RBP18.2■□□□□ 0.5
USP43-204ENST00000573955 PCDHAC2Q9Y5I4 1007 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 SLX4Q8IY92 1834 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
USP43-204ENST00000573955 ZNF174Q15697 407 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 DRC7Q8IY82 874 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 CEP57L1Q8IYX8 460 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 USP40Q9NVE5 1235 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 MAD2L2Q9UI95 211 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 FOXN1O15353 648 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
USP43-204ENST00000573955 PFKFB3Q16875 520 aaPredicted RBP18.19■□□□□ 0.5
USP43-204ENST00000573955 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 USP49Q70CQ1 688 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 DDX60LQ5H9U9 1706 aaKnown RBP18.19■□□□□ 0.5
USP43-204ENST00000573955 TRIM75PA6NK02 468 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 CCDC172P0C7W6 258 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 SLC35G1Q2M3R5 365 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 EGFL6Q8IUX8 553 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 DHX40Q8IX18 779 aaKnown RBP18.19■□□□□ 0.5
USP43-204ENST00000573955 CEP95Q96GE4 821 aa18.19■□□□□ 0.5
USP43-204ENST00000573955 ADAMTSL1Q8N6G6 1762 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 C21orf2O43822 256 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 CACNB3P54284 484 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 CNNM3Q8NE01 707 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 RASGRP4Q8TDF6 673 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 MYH1P12882 1939 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 PTPREP23469 700 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 CYP2C19P33261 490 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 GRM4Q14833 912 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 CSRNP2Q9H175 543 aa18.18■□□□□ 0.5
USP43-204ENST00000573955 CYTH3O43739 400 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 CEP120Q8N960 986 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 POLR2DO15514 142 aaKnown RBP18.17■□□□□ 0.5
USP43-204ENST00000573955 TYW1BQ6NUM6 668 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 HOMER1Q86YM7 354 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 CEP131Q9UPN4 1083 aa18.17■□□□□ 0.5
USP43-204ENST00000573955 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 CAVIN2O95810 425 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 ZNF75DP51815 510 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.5
USP43-204ENST00000573955 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
USP43-204ENST00000573955 GRAMD1CQ8IYS0 662 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 NEDD1Q8NHV4 660 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 ANKS1AQ92625 1134 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 TNFRSF25Q93038 417 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 VAT1LQ9HCJ6 419 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms