RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 GREB1LQ9C091 1923 aaPredicted RBP11.18□□□□□ -0.62
NDE1-208ENST00000573694 DDTLA6NHG4 134 aaPredicted RBP11.18□□□□□ -0.62
NDE1-208ENST00000573694 USP17L5A8MUK1 530 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 F13A1P00488 732 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 FGRP09769 529 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 BCRP11274 1271 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 FCGRTP55899 365 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 IRF5Q13568 498 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 FOXD4L6Q3SYB3 417 aaPredicted RBP11.18□□□□□ -0.62
NDE1-208ENST00000573694 SLC9C1Q4G0N8 1177 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 FOXD4L3Q6VB84 417 aaPredicted RBP11.18□□□□□ -0.62
NDE1-208ENST00000573694 NFXL1Q6ZNB6 911 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 SH3BP5LQ7L8J4 393 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 TTC6Q86TZ1 520 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 PXYLP1Q8TE99 480 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 ESR2Q92731 530 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
NDE1-208ENST00000573694 SRRDQ9UH36 339 aa11.18□□□□□ -0.62
NDE1-208ENST00000573694 NID2Q14112 1375 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 TNKSO95271 1327 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 GOLGA8AA7E2F4 631 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 ORC4O43929 436 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
NDE1-208ENST00000573694 METAP2P50579 478 aaKnown RBP eCLIP11.17□□□□□ -0.62
NDE1-208ENST00000573694 WTAPQ15007 396 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 LARP1BQ659C4 914 aaKnown RBP11.17□□□□□ -0.62
NDE1-208ENST00000573694 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 ZFPM1Q8IX07 1006 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 SLC44A5Q8NCS7 719 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 TRIM47Q96LD4 638 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
NDE1-208ENST00000573694 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
NDE1-208ENST00000573694 CCDC69A6NI79 296 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 ZBTB43O43298 467 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 RANBP6O60518 1105 aaKnown RBP11.16□□□□□ -0.62
NDE1-208ENST00000573694 CDC27P30260 824 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 LIFRP42702 1097 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 PSMC4P43686 418 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 PLCD1P51178 756 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 PICALMQ13492 652 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 SEC23AQ15436 765 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 FAM47AQ5JRC9 791 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 SLAIN1Q8ND83 568 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
NDE1-208ENST00000573694 NMT2O60551 498 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 POLR3DP05423 398 aaPredicted RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 PDCP20941 246 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 OSBPP22059 807 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 BACE1P56817 501 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 UBXN2AP68543 259 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 HMGN5P82970 282 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 FERMT3Q86UX7 667 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 ZNF654Q8IZM8 581 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 FAM184AQ8NB25 1140 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 LMBRD1Q9NUN5 540 aa11.15□□□□□ -0.62
NDE1-208ENST00000573694 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
NDE1-208ENST00000573694 ERICH2A1L162 156 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 GOLGA6L22H0YM25 854 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 TRAK2O60296 914 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
NDE1-208ENST00000573694 GRK4P32298 578 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 ADD1P35611 737 aaKnown RBP11.14□□□□□ -0.63
NDE1-208ENST00000573694 USP14P54578 494 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 SOX10P56693 466 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 PDE4BQ07343 736 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 RESTQ13127 1097 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
NDE1-208ENST00000573694 RAET1EQ8TD07 263 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 SMCR8Q8TEV9 937 aaPredicted RBP11.14□□□□□ -0.63
NDE1-208ENST00000573694 COA7Q96BR5 231 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 MTA3Q9BTC8 594 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 SLC12A7Q9Y666 1083 aa11.14□□□□□ -0.63
NDE1-208ENST00000573694 TSPY2A6NKD2 308 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 USP17L10C9JJH3 530 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 CPLX1O14810 134 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 GJB1P08034 283 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms