RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ARHGAP25P42331 645 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 PIP4K2BP78356 416 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 TRIM14Q14142 442 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 IL17AQ16552 155 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 PARP10Q53GL7 1025 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 ZNF658Q5TYW1 1059 aaPredicted RBP17.65■□□□□ 0.42
NUP88-207ENST00000573584 CTAGE6Q86UF2 777 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 CTAGE4Q8IX94 777 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 PDE11AQ9HCR9 933 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 ABCB6Q9NP58 842 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 MYO1AQ9UBC5 1043 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 CNTNAP5Q8WYK1 1306 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
NUP88-207ENST00000573584 WHAMMP3Q1A5X7 153 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 CTR9Q6PD62 1173 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 EXOC4Q96A65 974 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 UBXN1Q04323 297 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 INTS5Q6P9B9 1019 aaKnown RBP17.65■□□□□ 0.42
NUP88-207ENST00000573584 RMND1Q9NWS8 449 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
NUP88-207ENST00000573584 ZNF804BA4D1E1 1349 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
NUP88-207ENST00000573584 USP17L12C9JPN9 530 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 USP17L21D6R901 530 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 EXOC5O00471 708 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 FGRP09769 529 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 PCP11498 1178 aaKnown RBP17.64■□□□□ 0.41
NUP88-207ENST00000573584 SCG2P13521 617 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 HSPA2P54652 639 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 NMT2O60551 498 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 RPN1P04843 607 aaKnown RBP17.64■□□□□ 0.41
NUP88-207ENST00000573584 TRERF1Q96PN7 1200 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
NUP88-207ENST00000573584 LMAN1P49257 510 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 ZBTB9Q96C00 473 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 CHP1Q99653 195 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 CCDC87Q9NVE4 849 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 GDAQ9Y2T3 454 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 PLCH1Q4KWH8 1693 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 TULP2O00295 520 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 NTSR2O95665 410 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
NUP88-207ENST00000573584 PRCPP42785 496 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 VSNL1P62760 191 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 ZSCAN26Q16670 478 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 MYO6Q9UM54 1294 aa17.63■□□□□ 0.41
NUP88-207ENST00000573584 EIF3JO75822 258 aaKnown RBP17.62■□□□□ 0.41
NUP88-207ENST00000573584 FAM47AQ5JRC9 791 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 WWC2Q6AWC2 1192 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 VPS18Q9P253 973 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 EPN1Q9Y6I3 576 aaPredicted RBP17.62■□□□□ 0.41
NUP88-207ENST00000573584 MYH2Q9UKX2 1941 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 A0A0G2JS52 829 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 H7C1D1 291 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 ADAMTS3O15072 1205 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 CAVIN4Q5BKX8 364 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 GUCA1BQ9UMX6 200 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 DUOX1Q9NRD9 1551 aa17.62■□□□□ 0.41
NUP88-207ENST00000573584 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 EVX2Q03828 476 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 PFKFB3Q16875 520 aaPredicted RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 ZNF384Q8TF68 577 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 NDUFA10O95299 355 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 LONP1P36776 959 aaKnown RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 STAT6P42226 847 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 ARL6IP4Q66PJ3 421 aaKnown RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 NOA1Q8NC60 698 aaKnown RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 GBP3Q9H0R5 595 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 AMPD2Q01433 879 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 RAD51AP2Q09MP3 1159 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 NCAPH2Q6IBW4 605 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 IRF2BP1Q8IU81 584 aa17.61■□□□□ 0.41
NUP88-207ENST00000573584 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
NUP88-207ENST00000573584 TTC26A0AVF1 554 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 PES1O00541 588 aaKnown RBP17.6■□□□□ 0.41
NUP88-207ENST00000573584 TUBBP07437 444 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 OR8K1Q8NGG5 319 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 TRIM10Q9UDY6 481 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
NUP88-207ENST00000573584 REXO2Q9Y3B8 237 aaKnown RBP17.6■□□□□ 0.41
NUP88-207ENST00000573584 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 COL1A1P02452 1464 aaPredicted RBP17.6■□□□□ 0.41
NUP88-207ENST00000573584 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 TRIM49BA6NDI0 452 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 N4BP1O75113 896 aaKnown RBP17.6■□□□□ 0.41
NUP88-207ENST00000573584 CASP8Q14790 479 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 ANKRD18AQ8IVF6 992 aa17.6■□□□□ 0.41
NUP88-207ENST00000573584 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
NUP88-207ENST00000573584 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
NUP88-207ENST00000573584 BAZ2BQ9UIF8 2168 aaKnown RBP17.59■□□□□ 0.41
NUP88-207ENST00000573584 ORC4O43929 436 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms