RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 BCAP29Q9UHQ4 241 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 FLT4P35916 1363 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 PLB1Q6P1J6 1458 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 HPDP32754 393 aaPredicted RBP10.41□□□□□ -0.74
USP6-204ENST00000572949 UVSSAQ2YD98 709 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 EFCAB13Q8IY85 973 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 ARHGAP24Q8N264 748 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 SEPT9Q9UHD8 586 aaPredicted RBP10.41□□□□□ -0.74
USP6-204ENST00000572949 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
USP6-204ENST00000572949 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 RAB20Q9NX57 234 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 ZHX1Q9UKY1 873 aaPredicted RBP10.41□□□□□ -0.74
USP6-204ENST00000572949 PNMA3Q9UL41 463 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 DLATP10515 647 aaKnown RBP10.41□□□□□ -0.74
USP6-204ENST00000572949 PIK3CAP42336 1068 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP6-204ENST00000572949 BEND3Q5T5X7 828 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 ZNF233A6NK53 670 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 AKR1B15C9JRZ8 316 aaPredicted RBP10.41□□□□□ -0.74
USP6-204ENST00000572949 NDUFAF2Q8N183 169 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 LPIN2Q92539 896 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 MTRQ99707 1265 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 ESYT1Q9BSJ8 1104 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 VCX3AQ9NNX9 186 aa10.41□□□□□ -0.74
USP6-204ENST00000572949 FAM95CA0A1B0GW59 222 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 EPHB1P54762 984 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 RAB44Q7Z6P3 723 aaPredicted RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 XAGE2Q96GT9 111 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 VPS37BQ9H9H4 285 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 NLGN1Q8N2Q7 840 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 ZBTB9Q96C00 473 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 K7ENM7 598 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 NEMP1O14524 444 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 IFNB1P01574 187 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 ATP2B4P23634 1241 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 PHBP35232 272 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 PDE1AP54750 535 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 DALRD3Q5D0E6 543 aaKnown RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 NELFCDQ8IXH7 590 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 JPH2Q9BR39 696 aaPredicted RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 HNRNPCL2B2RXH8 293 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 NVLO15381 856 aaKnown RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 HNRNPCL1O60812 293 aaKnown RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 OCM2P0CE71 109 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 OCMP0CE72 109 aaPredicted RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 RECQLP46063 649 aaPredicted RBP10.4□□□□□ -0.74
USP6-204ENST00000572949 TIMM10P62072 90 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 ODR4Q5SWX8 454 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 MCTP2Q6DN12 878 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 RNF139Q8WU17 664 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 ANKRD36BP1Q96IX9 119 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 TXNDC9O14530 226 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 PPP2R3CQ969Q6 453 aa10.4□□□□□ -0.74
USP6-204ENST00000572949 TRPM2O94759 1503 aa10.4□□□□□ -0.75
USP6-204ENST00000572949 NCAPD3P42695 1498 aa10.4□□□□□ -0.75
USP6-204ENST00000572949 EBAG9O00559 213 aa10.4□□□□□ -0.75
USP6-204ENST00000572949 PPFIA4O75335 1185 aa10.4□□□□□ -0.75
USP6-204ENST00000572949 IL1RL1Q01638 556 aa10.4□□□□□ -0.75
USP6-204ENST00000572949 ARMCX5Q6P1M9 558 aa10.4□□□□□ -0.75
USP6-204ENST00000572949 PRDM5Q9NQX1 630 aaPredicted RBP10.4□□□□□ -0.75
USP6-204ENST00000572949 POLR2DO15514 142 aaKnown RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 RAPH1Q70E73 1250 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 YAF2Q8IY57 180 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 TRIML1Q8N9V2 468 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 WHAMMQ8TF30 809 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 TEKT3Q9BXF9 490 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 PRDM10Q9NQV6 1147 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 USH1CQ9Y6N9 552 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 AK9Q5TCS8 1911 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 TFAP4Q01664 338 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 TRIM14Q14142 442 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 ZNF790Q6PG37 636 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 SPATA5Q8NB90 893 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 PSTPIP2Q9H939 334 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 IL16Q14005 1332 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 GBP1P32455 592 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 EIF4A2Q14240 407 aaKnown RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 NACC1Q96RE7 527 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 NUP58Q9BVL2 599 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 SMYD2Q9NRG4 433 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 RNF8O76064 485 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 BCAMP50895 628 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 C8orf74Q6P047 294 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 USP14P54578 494 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 GOLGA8FQ08AF8 430 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 GOLGA8DPQ0D2H9 430 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 C10orf67Q8IYJ2 551 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 SLFN12Q8IYM2 578 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 COA7Q96BR5 231 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 IFNKQ9P0W0 207 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms