RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 SGMS1Q86VZ5 419 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 RAB11FIP4Q86YS3 637 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 CTCFLQ8NI51 663 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 GMCL1Q96IK5 515 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 MYL10Q9BUA6 226 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 AGTPBP1Q9UPW5 1226 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 LAMA4Q16363 1823 aa11.02□□□□□ -0.64
NPLOC4-208ENST00000572351 GOLGA8AA7E2F4 631 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L15C9J2P7 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L11C9JVI0 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L18D6R9N7 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L22D6RA61 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L19D6RCP7 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L20D6RJB6 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 PDHXO00330 501 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 DHX16O60231 1041 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 PDHBP11177 359 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 RXRAP19793 462 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 MAP2K2P36507 400 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 USP17L24Q0WX57 530 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 KCTD1Q719H9 257 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 CCDC144CPQ8IYA2 1237 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 IL27Q8NEV9 243 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 BRPF3Q9ULD4 1205 aa11.02□□□□□ -0.65
NPLOC4-208ENST00000572351 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 BTBD19C9JJ37 291 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 FLOT1O75955 427 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 GOLGA8HP0CJ92 632 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 METAP2P50579 478 aaKnown RBP eCLIP11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 ZNF543Q08ER8 600 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 TROAPQ12815 778 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 GRM4Q14833 912 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 RTN1Q16799 776 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 ASPRV1Q53RT3 343 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 GPATCH4Q5T3I0 446 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 APOA5Q6Q788 366 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 FAM43AQ8N2R8 423 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 ZIC5Q96T25 663 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 PARK7Q99497 189 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 AGXT2Q9BYV1 514 aa11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 CTDP1Q9Y5B0 961 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-208ENST00000572351 DOCK1Q14185 1865 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 POLR2AP24928 1970 aaKnown RBP11□□□□□ -0.65
NPLOC4-208ENST00000572351 CCDC196A0A1B0GTZ2 297 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 ALDH1A1P00352 501 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 SNHG28P0DPA3 235 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 MCM2P49736 904 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 GNAQP50148 359 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 STAT2P52630 851 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 RCAN1P53805 252 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 STK3Q13188 491 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 MOGSQ13724 837 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 GPAT2Q6NUI2 795 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 CATSPERGQ6ZRH7 1159 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 FAM160B2Q86V87 743 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 FANCBQ8NB91 859 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 KIFC2Q96AC6 838 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 PTPN18Q99952 460 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 SLF1Q9BQI6 1058 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 BEGAINQ9BUH8 593 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
NPLOC4-208ENST00000572351 RBM28Q9NW13 759 aaKnown RBP11□□□□□ -0.65
NPLOC4-208ENST00000572351 FEM1BQ9UK73 627 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 TPCN1Q9ULQ1 816 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 SLC45A1Q9Y2W3 748 aa11□□□□□ -0.65
NPLOC4-208ENST00000572351 IGF2BP3O00425 579 aaKnown RBP eCLIP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 CPLX1O14810 134 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 CYP2C8P10632 490 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 PDIA3P30101 505 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 HOXA7P31268 230 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 SLC16A2P36021 539 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 TM4SF4P48230 202 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 CCT2P78371 535 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 COG2Q14746 738 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 SYDE2Q5VT97 1194 aa10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 CPLX2Q6PUV4 134 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 ZNF274Q96GC6 653 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-208ENST00000572351 MAP3K14Q99558 947 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms