RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	GK5	Q6ZS86	529 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	USP48	Q86UV5	1035 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	ZNF655	Q8N720	491 aa	Predicted RBP	5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	DAGLB	Q8NCG7	672 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	VWCE	Q96DN2	955 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	LIN37	Q96GY3	246 aa	Predicted RBP	5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	PEG3	Q9GZU2	1588 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	SLC6A17	Q9H1V8	727 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	EPB41L4B	Q9H329	900 aa		5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	CWC22	Q9HCG8	908 aa	Known RBP	5.78	□□□□□ -1.48
CDC27-213	ENST00000571643	SSU72P8	A0A1W2PR75	194 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	TNFRSF10C	O14798	259 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	LRRN2	O75325	713 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	TSPAN15	O95858	294 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	ZGLP1	P0C6A0	271 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	FANCC	Q00597	558 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	MESP2	Q0VG99	397 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	SNX17	Q15036	470 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	RNF34	Q969K3	372 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	ATG4C	Q96DT6	458 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	SPATA32	Q96LK8	384 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	HDAC8	Q9BY41	377 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	ADAMTS10	Q9H324	1103 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	PRR13	Q9NZ81	148 aa		5.77	□□□□□ -1.49
CDC27-213	ENST00000571643	HMGXB3	Q12766	1538 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	NME1	P15531	152 aa	Known RBP	5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	PCBP3	P57721	371 aa	Known RBP	5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	TEK	Q02763	1124 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	CLC	Q05315	142 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	FBLN7	Q53RD9	439 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	IRF2BP1	Q8IU81	584 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	TAB3	Q8N5C8	712 aa	Predicted RBP	5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	DHRS1	Q96LJ7	313 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	KRTAP4-2	Q9BYR5	136 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	BACH2	Q9BYV9	841 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	ZNRF3	Q9ULT6	936 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	ATAD2B	Q9ULI0	1458 aa		5.76	□□□□□ -1.49
CDC27-213	ENST00000571643	SHISA3	A0PJX4	238 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	WASH4P	A8MWX3	477 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	SCAMP3	O14828	347 aa	Known RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	SIGLEC6	O43699	453 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	RAP1GAP	P47736	663 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	COL9A2	Q14055	689 aa	Predicted RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	NBPF9	Q3BBW0	867 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	INTS3	Q68E01	1043 aa	Known RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	PRR23B	Q6ZRT6	265 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	CILP2	Q8IUL8	1156 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	SMARCC1	Q92922	1105 aa	Predicted RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	EAF1	Q96JC9	268 aa	Predicted RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	TOX2	Q96NM4	488 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	SLC26A8	Q96RN1	970 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	MKRN2	Q9H000	416 aa	Known RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	NSUN3	Q9H649	340 aa	Known RBP	5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	PCDHB12	Q9Y5F1	795 aa		5.75	□□□□□ -1.49
CDC27-213	ENST00000571643	NFIB	O00712	420 aa		5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	POLR2B	P30876	1174 aa	Known RBP	5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	KIR2DL1	P43626	348 aa	Predicted RBP	5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	KIR2DL2	P43627	348 aa	Predicted RBP	5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	LDLRAD1	Q5T700	205 aa		5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	LINC00116	Q8NCU8	138 aa		5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	FERD3L	Q96RJ6	166 aa		5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	TM9SF2	Q99805	663 aa		5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.74	□□□□□ -1.49
CDC27-213	ENST00000571643	ERVFC1	P60507	584 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	ZNF124	Q15973	351 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	TCTN2	Q96GX1	697 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	SLC6A18	Q96N87	628 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	DIRC2	Q96SL1	478 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	RNF32	Q9H0A6	362 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	TCFL5	Q9UL49	500 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	ZNF281	Q9Y2X9	895 aa		5.73	□□□□□ -1.49
CDC27-213	ENST00000571643	PRAMEF1	O95521	474 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	RECK	O95980	971 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	WAPL	Q7Z5K2	1190 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	TMC3	Q7Z5M5	1100 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	ZNF654	Q8IZM8	581 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	LINC01599	Q8WXQ3	324 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	INTS4	Q96HW7	963 aa	Known RBP	5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	FCRL2	Q96LA5	508 aa	Predicted RBP	5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	SP110	Q9HB58	689 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	CHST7	Q9NS84	486 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	SUCO	Q9UBS9	1254 aa	Known RBP	5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	GPR160	Q9UJ42	338 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	ZMYM5	Q9UJ78	669 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	YBX2	Q9Y2T7	364 aa	Known RBP	5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	MROH2B	Q7Z745	1585 aa		5.72	□□□□□ -1.49
CDC27-213	ENST00000571643	SYP	P08247	313 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	TMEM253	P0C7T8	217 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	GLDC	P23378	1020 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	RPL10	P27635	214 aa	Known RBP	5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	BBS9	Q3SYG4	887 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	ZNF394	Q53GI3	561 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	ANKLE2	Q86XL3	938 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	MAP6	Q96JE9	813 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	FOXP3	Q9BZS1	431 aa		5.71	□□□□□ -1.5
CDC27-213	ENST00000571643	PRDM14	Q9GZV8	571 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms