RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 WDR46O15213 610 aaKnown RBP13.81□□□□□ -0.2
CDRT1-206ENST00000571263 STX6O43752 255 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 NDUFB10O96000 172 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 FDX1P10109 184 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 FUT2Q10981 343 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 SPP2Q13103 211 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 PRKG1Q13976 671 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 VGLL4Q14135 290 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 CCDC96Q2M329 555 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 BTNL9Q6UXG8 535 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 CLEC10AQ8IUN9 316 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
CDRT1-206ENST00000571263 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
CDRT1-206ENST00000571263 DDX11Q96FC9 970 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 GBA2Q9HCG7 927 aaPredicted RBP13.81□□□□□ -0.2
CDRT1-206ENST00000571263 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
CDRT1-206ENST00000571263 FEM1BQ9UK73 627 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 AFG3L2Q9Y4W6 797 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 ATP6V1DQ9Y5K8 247 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 SNCAIPQ9Y6H5 919 aa13.81□□□□□ -0.2
CDRT1-206ENST00000571263 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
CDRT1-206ENST00000571263 MYH4Q9Y623 1939 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 GOLGB1Q14789 3259 aaKnown RBP13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SPDYE5A6NIY4 337 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 H3BQV1 296 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 RAD21O60216 631 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 JAK2O60674 1132 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 ITGBL1O95965 494 aaPredicted RBP13.8□□□□□ -0.2
CDRT1-206ENST00000571263 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SYT1P21579 422 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 ECE1P42892 770 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SH3D19Q5HYK7 790 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 IFFO2Q5TF58 517 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SMC1BQ8NDV3 1235 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 CCDC12Q8WUD4 166 aaPredicted RBP13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 C8orf76Q96K31 380 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 ALG1Q9BT22 464 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 ATAD5Q96QE3 1844 aa13.8□□□□□ -0.2
CDRT1-206ENST00000571263 PLEKHA8P1O95397 391 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 STAT2P52630 851 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 PPIL2Q13356 520 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
CDRT1-206ENST00000571263 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 PHKBQ93100 1093 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
CDRT1-206ENST00000571263 PAPPA2Q9BXP8 1791 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 TOMM70O94826 608 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 CELF2O95319 508 aaKnown RBP13.78□□□□□ -0.2
CDRT1-206ENST00000571263 BRD1O95696 1058 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 SCG2P13521 617 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDRT1-206ENST00000571263 GALNT17Q6IS24 598 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 KCTD1Q719H9 257 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 FASTKD5Q7L8L6 764 aaKnown RBP13.78□□□□□ -0.2
CDRT1-206ENST00000571263 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 CCDC148Q8NFR7 591 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 ZSCAN16Q9H4T2 348 aaPredicted RBP13.78□□□□□ -0.2
CDRT1-206ENST00000571263 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
CDRT1-206ENST00000571263 ISY1Q9ULR0 285 aaKnown RBP13.78□□□□□ -0.2
CDRT1-206ENST00000571263 FRMPD2Q68DX3 1309 aaPredicted RBP13.78□□□□□ -0.2
CDRT1-206ENST00000571263 PNMA6FA0A0J9YX94 578 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 TRAF5O00463 557 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
CDRT1-206ENST00000571263 CALML3P27482 149 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 IKQ13123 557 aaPredicted RBP13.77□□□□□ -0.21
CDRT1-206ENST00000571263 PABPC4Q13310 644 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDRT1-206ENST00000571263 MTMR2Q13614 643 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 DLK2Q6UY11 383 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
CDRT1-206ENST00000571263 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.21
CDRT1-206ENST00000571263 PROCA1Q8NCQ7 364 aaPredicted RBP13.77□□□□□ -0.21
CDRT1-206ENST00000571263 MTMR8Q96EF0 704 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 GLT8D2Q9H1C3 349 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 ELP3Q9H9T3 547 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 BRMS1Q9HCU9 246 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 KCNH4Q9UQ05 1017 aa13.77□□□□□ -0.21
CDRT1-206ENST00000571263 MYPNQ86TC9 1320 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 TRIM75PA6NK02 468 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 UBE2Q2LH0YL09 131 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 KIF3CO14782 793 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 ZBTB5O15062 677 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 CYTH3O43739 400 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 FSTL1Q12841 308 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms