RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SEMA6BQ9H3T3 888 aa22.89■■□□□ 1.25
SCARF1-204ENST00000570902 XPNPEP3Q9NQH7 507 aa22.89■■□□□ 1.25
SCARF1-204ENST00000570902 PHF24Q9UPV7 400 aa22.89■■□□□ 1.25
SCARF1-204ENST00000570902 DIS3Q9Y2L1 958 aaKnown RBP22.89■■□□□ 1.25
SCARF1-204ENST00000570902 TACC3Q9Y6A5 838 aa22.89■■□□□ 1.25
SCARF1-204ENST00000570902 MBD4O95243 580 aa22.88■■□□□ 1.25
SCARF1-204ENST00000570902 KCTD2Q14681 263 aa22.88■■□□□ 1.25
SCARF1-204ENST00000570902 CLEC10AQ8IUN9 316 aa22.88■■□□□ 1.25
SCARF1-204ENST00000570902 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.88■■□□□ 1.25
SCARF1-204ENST00000570902 PAG1Q9NWQ8 432 aa22.88■■□□□ 1.25
SCARF1-204ENST00000570902 ADAMTS5Q9UNA0 930 aa22.88■■□□□ 1.25
SCARF1-204ENST00000570902 TRIM43BA6NCK2 446 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 HMMRO75330 724 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 COPB2P35606 906 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 CDK8P49336 464 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 TLE2Q04725 743 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 C12orf60Q5U649 245 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 SH3RF1Q7Z6J0 888 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 RIOX2Q8IUF8 465 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 TRIM43Q96BQ3 446 aaPredicted RBP22.87■■□□□ 1.25
SCARF1-204ENST00000570902 TINF2Q9BSI4 451 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 KANSL2Q9H9L4 492 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 ROBO3Q96MS0 1386 aa22.87■■□□□ 1.25
SCARF1-204ENST00000570902 APBB1O00213 710 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 PRKAB2O43741 272 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 CLTBP09497 229 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 ADD2P35612 726 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
SCARF1-204ENST00000570902 RPAP2Q8IXW5 612 aaPredicted RBP22.86■■□□□ 1.25
SCARF1-204ENST00000570902 MAFAQ8NHW3 353 aaPredicted RBP22.86■■□□□ 1.25
SCARF1-204ENST00000570902 PANK1Q8TE04 598 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 GOPCQ9HD26 462 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 PARP14Q460N5 1801 aa22.86■■□□□ 1.25
SCARF1-204ENST00000570902 PGK2P07205 417 aa22.85■■□□□ 1.25
SCARF1-204ENST00000570902 MS4A1P11836 297 aa22.85■■□□□ 1.25
SCARF1-204ENST00000570902 EEF2P13639 858 aaKnown RBP22.85■■□□□ 1.25
SCARF1-204ENST00000570902 AKR1A1P14550 325 aa22.85■■□□□ 1.25
SCARF1-204ENST00000570902 STAT3P40763 770 aa22.85■■□□□ 1.25
SCARF1-204ENST00000570902 C16orf86Q6ZW13 317 aa22.85■■□□□ 1.25
SCARF1-204ENST00000570902 USP17L12C9JPN9 530 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 USP17L21D6R901 530 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 VWA5AO00534 786 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 RAB11FIP3O75154 756 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 ZNF792Q3KQV3 632 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 PPP1R9AQ9ULJ8 1098 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 CNPY2Q9Y2B0 182 aa22.84■■□□□ 1.25
SCARF1-204ENST00000570902 ZNFX1Q9P2E3 1918 aaKnown RBP22.83■■□□□ 1.25
SCARF1-204ENST00000570902 TMEM265A0A087WTH1 108 aa22.83■■□□□ 1.25
SCARF1-204ENST00000570902 A0A1W2PQ45 241 aaPredicted RBP22.83■■□□□ 1.25
SCARF1-204ENST00000570902 A0A1W2PQY0 241 aa22.83■■□□□ 1.25
SCARF1-204ENST00000570902 KIAA0355O15063 1070 aa22.83■■□□□ 1.25
SCARF1-204ENST00000570902 PGK1P00558 417 aa22.83■■□□□ 1.25
SCARF1-204ENST00000570902 RNPC3Q96LT9 517 aaKnown RBP22.83■■□□□ 1.25
SCARF1-204ENST00000570902 TTYH1Q9H313 450 aaPredicted RBP22.83■■□□□ 1.25
SCARF1-204ENST00000570902 BOLA2Q9H3K6 86 aa22.83■■□□□ 1.25
SCARF1-204ENST00000570902 FBXO28Q9NVF7 368 aa22.83■■□□□ 1.25
SCARF1-204ENST00000570902 EYSQ5T1H1 3165 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 CYP2D7A0A087X1C5 515 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 RAG1P15918 1043 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 ATP5JP18859 108 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 UBE3CQ15386 1083 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 MSL3Q8N5Y2 521 aaKnown RBP22.82■■□□□ 1.24
SCARF1-204ENST00000570902 MYLIPQ8WY64 445 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 HAUS7Q99871 368 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 TSEN34Q9BSV6 310 aaKnown RBP22.82■■□□□ 1.24
SCARF1-204ENST00000570902 BCL11AQ9H165 835 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 ZNF214Q9UL59 606 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-204ENST00000570902 SLC4A4Q9Y6R1 1079 aa22.82■■□□□ 1.24
SCARF1-204ENST00000570902 BAZ2AQ9UIF9 1905 aaKnown RBP22.82■■□□□ 1.24
SCARF1-204ENST00000570902 COL11A1P12107 1806 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-204ENST00000570902 VCANP13611 3396 aa22.81■■□□□ 1.24
SCARF1-204ENST00000570902 RAD21O60216 631 aa22.81■■□□□ 1.24
SCARF1-204ENST00000570902 PQBP1O60828 265 aaKnown RBP22.81■■□□□ 1.24
SCARF1-204ENST00000570902 ZNF865P0CJ78 1059 aaPredicted RBP22.81■■□□□ 1.24
SCARF1-204ENST00000570902 FOSL2P15408 326 aa22.81■■□□□ 1.24
SCARF1-204ENST00000570902 ITGB8P26012 769 aa22.81■■□□□ 1.24
SCARF1-204ENST00000570902 SLFNL1Q499Z3 407 aa22.81■■□□□ 1.24
SCARF1-204ENST00000570902 ZBED9Q6R2W3 1325 aa22.81■■□□□ 1.24
SCARF1-204ENST00000570902 PLXNA1Q9UIW2 1896 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 TAL1P17542 331 aaPredicted RBP22.8■■□□□ 1.24
SCARF1-204ENST00000570902 FPGSQ05932 587 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 FAM83BQ5T0W9 1011 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 ZSCAN25Q6NSZ9 544 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 REPS2Q8NFH8 660 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 NUP133Q8WUM0 1156 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 TOX2Q96NM4 488 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 TMEM39AQ9NV64 488 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
SCARF1-204ENST00000570902 CDH23Q9H251 3354 aa22.8■■□□□ 1.24
SCARF1-204ENST00000570902 SMIM22K7EJ46 135 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 CTR9Q6PD62 1173 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 ANKRD33Q7Z3H0 272 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 TEX13BQ9BXU2 312 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 STARD7Q9NQZ5 370 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 DDX19BQ9UMR2 479 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 SYNGAP1Q96PV0 1343 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 SMCHD1A6NHR9 2005 aa22.79■■□□□ 1.24
SCARF1-204ENST00000570902 MOXD2PA6NHM9 499 aa22.78■■□□□ 1.24
SCARF1-204ENST00000570902 DCDC2CA8MYV0 355 aa22.78■■□□□ 1.24
SCARF1-204ENST00000570902 ADAMTS4O75173 837 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms