RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 LYPD8Q6UX82 237 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 ITPRIPQ8IWB1 547 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 CRACR2BQ8N4Y2 399 aaPredicted RBP7.94□□□□□ -1.14
SMG6-204ENST00000570606 TMEM57Q8N5G2 664 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 TGFBRAP1Q8WUH2 860 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 DEFB118Q96PH6 123 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
SMG6-204ENST00000570606 DBNDD2Q9BQY9 259 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 ASCC2Q9H1I8 757 aaPredicted RBP7.94□□□□□ -1.14
SMG6-204ENST00000570606 TMOD4Q9NZQ9 345 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 PI4KBQ9UBF8 816 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 PCDHB3Q9Y5E6 796 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 FPGT-TNNI3KV9GXZ4 949 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 FLT1P17948 1338 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 GDF11O95390 407 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 HMGCRP04035 888 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 ASNSP08243 561 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 UBE2Q1Q7Z7E8 422 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 ADAMTS19Q8TE59 1207 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 CALR3Q96L12 384 aaKnown RBP7.93□□□□□ -1.14
SMG6-204ENST00000570606 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMG6-204ENST00000570606 DHX36Q9H2U1 1008 aaKnown RBP7.93□□□□□ -1.14
SMG6-204ENST00000570606 GPR108Q9NPR9 543 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 PAK6Q9NQU5 681 aaPredicted RBP7.93□□□□□ -1.14
SMG6-204ENST00000570606 SAP30BPQ9UHR5 308 aaKnown RBP7.93□□□□□ -1.14
SMG6-204ENST00000570606 FRMPD3Q5JV73 1810 aa7.93□□□□□ -1.14
SMG6-204ENST00000570606 ZBTB7BO15156 539 aaPredicted RBP7.92□□□□□ -1.14
SMG6-204ENST00000570606 NR1I2O75469 434 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 SURF6O75683 361 aaKnown RBP7.92□□□□□ -1.14
SMG6-204ENST00000570606 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
SMG6-204ENST00000570606 ZAP70P43403 619 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 BACE1P56817 501 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 PDE3AQ14432 1141 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 RRP1BQ14684 758 aaKnown RBP7.92□□□□□ -1.14
SMG6-204ENST00000570606 ADGRA1Q86SQ6 560 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 CCAR1Q8IX12 1150 aaKnown RBP7.92□□□□□ -1.14
SMG6-204ENST00000570606 FEZ1Q99689 392 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 DNAJC18Q9H819 358 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 CWC22Q9HCG8 908 aaKnown RBP7.92□□□□□ -1.14
SMG6-204ENST00000570606 PALD1Q9ULE6 856 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 ZBTB21Q9ULJ3 1066 aa7.92□□□□□ -1.14
SMG6-204ENST00000570606 USP17L10C9JJH3 530 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 IDH1O75874 414 aaKnown RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 CAPN2P17655 700 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 CYP7A1P22680 504 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 USP5P45974 858 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 HERVK_113P62684 666 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMG6-204ENST00000570606 SHROOM1Q2M3G4 852 aaPredicted RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 THSD4Q6ZMP0 1018 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 NECAB2Q7Z6G3 386 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 SSH3Q8TE77 659 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 DIS3LQ8TF46 1054 aaKnown RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 GTF3C2Q8WUA4 911 aaPredicted RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 SOCS4Q8WXH5 440 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 PAWRQ96IZ0 340 aaKnown RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 PAGR1Q9BTK6 254 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 WDR18Q9BV38 432 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 PIH1D3Q9NQM4 214 aaKnown RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 GINM1Q9NU53 330 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 TLR7Q9NYK1 1049 aaKnown RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 MORF4L1Q9UBU8 362 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 DBNLQ9UJU6 430 aaKnown RBP7.91□□□□□ -1.14
SMG6-204ENST00000570606 LAMA3Q16787 3333 aa7.91□□□□□ -1.14
SMG6-204ENST00000570606 MYH7P12883 1935 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 RPTORQ8N122 1335 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 C19orf81C9J6K1 198 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 ZKSCAN1P17029 563 aaPredicted RBP7.9□□□□□ -1.14
SMG6-204ENST00000570606 CYP2B6P20813 491 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 DYNLL1P63167 89 aaKnown RBP7.9□□□□□ -1.14
SMG6-204ENST00000570606 ATP8B2P98198 1209 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 VAC14Q08AM6 782 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 TRIM32Q13049 653 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
SMG6-204ENST00000570606 CERS3Q8IU89 383 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 C7orf61Q8IZ16 206 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 MIGA1Q8NAN2 632 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 GPRC5AQ8NFJ5 357 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
SMG6-204ENST00000570606 CCDC8Q9H0W5 538 aaPredicted RBP7.9□□□□□ -1.14
SMG6-204ENST00000570606 A0A1W2PPC1 479 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 PEX10O60683 326 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 IGSF3O75054 1194 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
SMG6-204ENST00000570606 GH2P01242 217 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 MAPK4P31152 587 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 HOXA7P31268 230 aaPredicted RBP7.89□□□□□ -1.15
SMG6-204ENST00000570606 RGS2P41220 211 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 ERVK-9P63128 1117 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 ERVK-24P63145 666 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 MAP3K12Q12852 859 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 RAB3GAP1Q15042 981 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 USP17L2Q6R6M4 530 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 AACSQ86V21 672 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 ERC1Q8IUD2 1116 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 FOXP4Q8IVH2 680 aaPredicted RBP7.89□□□□□ -1.15
SMG6-204ENST00000570606 MAGEB6Q8N7X4 407 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 TRIB2Q92519 343 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 ZNF512BQ96KM6 892 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms