RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 PPP2R5AQ15172 486 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.19□□□□□ -0.94
TCF4-246ENST00000570287 NEK1Q96PY6 1258 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 KCND1Q9NSA2 647 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 TAF6LQ9Y6J9 622 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 TNNT1P13805 278 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 TIE1P35590 1138 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 NOP2P46087 812 aaKnown RBP9.18□□□□□ -0.94
TCF4-246ENST00000570287 LARP1BQ659C4 914 aaKnown RBP9.18□□□□□ -0.94
TCF4-246ENST00000570287 FBXO38Q6PIJ6 1188 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 SENP7Q9BQF6 1050 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 PLA2G12BQ9BX93 195 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 KBTBD4Q9NVX7 518 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 STARD3NLO95772 234 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 PTGS1P23219 599 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 RAB27AP51159 221 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 TIMM10P62072 90 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 LRRC24Q50LG9 513 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 ZNF280DQ6N043 979 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 KIF6Q6ZMV9 814 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.94
TCF4-246ENST00000570287 OSBPL7Q9BZF2 842 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 A0A1B0GUL7 405 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 GOLIM4O00461 696 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 EXOC5O00471 708 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 PCCAP05165 728 aaPredicted RBP9.18□□□□□ -0.94
TCF4-246ENST00000570287 H2AFXP16104 143 aaPredicted RBP9.18□□□□□ -0.94
TCF4-246ENST00000570287 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
TCF4-246ENST00000570287 CCDC57Q2TAC2 916 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 CCDC129Q6ZRS4 1044 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 PLA2G4DQ86XP0 818 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 PIGBQ92521 554 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 DMRTB1Q96MA1 342 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
TCF4-246ENST00000570287 DSCC1Q9BVC3 393 aa9.18□□□□□ -0.94
TCF4-246ENST00000570287 DYTNA2CJ06 578 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 VPS37CA5D8V6 355 aaPredicted RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 FGAP02671 866 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 CYP21A2P08686 494 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 IFIT1P09914 478 aaKnown RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 ZMYM1Q5SVZ6 1142 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 ADAM32Q8TC27 787 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 ERO1AQ96HE7 468 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 C16orf45Q96MC5 204 aaPredicted RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 INO80BQ9C086 356 aaPredicted RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 AKAP2Q9Y2D5 859 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 PCDHGA4Q9Y5G9 962 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 FIBPO43427 364 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 KRT18P05783 430 aaKnown RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 CDC27P30260 824 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 DNM1Q05193 864 aaKnown RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 DNAJC10Q8IXB1 793 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 TCEANC2Q96MN5 208 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 SMAD5Q99717 465 aaKnown RBP9.17□□□□□ -0.94
TCF4-246ENST00000570287 DISP2A7MBM2 1401 aa9.17□□□□□ -0.94
TCF4-246ENST00000570287 CHGBP05060 677 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 CSF1RP07333 972 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 LRRFIP1Q32MZ4 808 aaKnown RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 TBCELQ5QJ74 424 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 CCSAPQ6IQ19 270 aaPredicted RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 LYPD8Q6UX82 237 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 CCDC81Q6ZN84 652 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 DDX42Q86XP3 938 aaKnown RBP eCLIP9.16□□□□□ -0.94
TCF4-246ENST00000570287 ZBTB38Q8NAP3 1195 aaPredicted RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 NOL10Q9BSC4 688 aaKnown RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 ZIM2Q9NZV7 527 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 ASAP1Q9ULH1 1129 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 POLIQ9UNA4 740 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 FHOD1Q9Y613 1164 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 ITGB4P16144 1822 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 LRP6O75581 1613 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 ERICH4A6NGS2 130 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 RNF113AO15541 343 aaKnown RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 KATNA1O75449 491 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 SEPT6Q14141 434 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 GTF3C6Q969F1 213 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 PAGR1Q9BTK6 254 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 UBXN6Q9BZV1 441 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 BTG4Q9NY30 223 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 COL14A1Q05707 1796 aaKnown RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 MAP3K15Q6ZN16 1313 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 KRT85P78386 507 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 CCDC158Q5M9N0 1113 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 RNF19BQ6ZMZ0 732 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 Q6ZUG5 572 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 SCG3Q8WXD2 468 aaKnown RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 AS3MTQ9HBK9 375 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 GINM1Q9NU53 330 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 SWAP70Q9UH65 585 aa9.16□□□□□ -0.94
TCF4-246ENST00000570287 ZNF215Q9UL58 517 aaPredicted RBP9.16□□□□□ -0.94
TCF4-246ENST00000570287 ABCC12Q96J65 1359 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 F12P00748 615 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms