RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	ARHGEF10L	Q9HCE6	1279 aa		13.31	□□□□□ -0.28
CMC2-223	ENST00000570195	XPNPEP3	Q9NQH7	507 aa		13.31	□□□□□ -0.28
CMC2-223	ENST00000570195	SWAP70	Q9UH65	585 aa		13.31	□□□□□ -0.28
CMC2-223	ENST00000570195	TMX2	Q9Y320	296 aa		13.31	□□□□□ -0.28
CMC2-223	ENST00000570195	CDH23	Q9H251	3354 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	TCRBV5S4A2T	A0A5A2	114 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	SMIM22	K7EJ46	135 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	APBB1	O00213	710 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	PGK1	P00558	417 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	RARB	P10826	455 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	FOSL2	P15408	326 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	TAL1	P17542	331 aa	Predicted RBP	13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	EPHB4	P54760	987 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	SLFNL1	Q499Z3	407 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	C1orf53	Q5VUE5	145 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	RHPN1	Q8TCX5	695 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	RNPC3	Q96LT9	517 aa	Known RBP	13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	MMP19	Q99542	508 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	SH2D4A	Q9H788	454 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	FBXO28	Q9NVF7	368 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	PHF24	Q9UPV7	400 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	TACC3	Q9Y6A5	838 aa		13.3	□□□□□ -0.28
CMC2-223	ENST00000570195	CYP2D7	A0A087X1C5	515 aa		13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	WDR46	O15213	610 aa	Known RBP	13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	PQBP1	O60828	265 aa	Known RBP	13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	SLC25A27	O95847	323 aa		13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	CLTB	P09497	229 aa		13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	RNF180	Q86T96	592 aa		13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	LENG1	Q96BZ8	264 aa	Predicted RBP	13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	TINF2	Q9BSI4	451 aa		13.29	□□□□□ -0.28
CMC2-223	ENST00000570195		U3KPZ7	1027 aa	Predicted RBP	13.29	□□□□□ -0.28
CMC2-223	ENST00000570195	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	RAD21	O60216	631 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	MBD4	O95243	580 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	RAG1	P15918	1043 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	CDK8	P49336	464 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	KCTD2	Q14681	263 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	ZNF792	Q3KQV3	632 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	RIOX2	Q8IUF8	465 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	CLASRP	Q8N2M8	674 aa	Known RBP	13.28	□□□□□ -0.28
CMC2-223	ENST00000570195	SMCHD1	A6NHR9	2005 aa		13.28	□□□□□ -0.28
CMC2-223	ENST00000570195		A0A1W2PQ45	241 aa	Predicted RBP	13.27	□□□□□ -0.29
CMC2-223	ENST00000570195		A0A1W2PQY0	241 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	KIAA0355	O15063	1070 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	CHGB	P05060	677 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	EEF2	P13639	858 aa	Known RBP	13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	STAT3	P40763	770 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	HSP90AB4P	Q58FF6	505 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	PANK1	Q8TE04	598 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	CCDC17	Q96LX7	622 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	TMEM39A	Q9NV64	488 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	NRBP1	Q9UHY1	535 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	PRUNE2	Q8WUY3	3088 aa		13.27	□□□□□ -0.29
CMC2-223	ENST00000570195	USP17L12	C9JPN9	530 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	USP17L21	D6R901	530 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	VWA5A	O00534	786 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	IFIT2	P09913	472 aa	Known RBP	13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	AKR1A1	P14550	325 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	ADD2	P35612	726 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	FPGS	Q05932	587 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	FAM83B	Q5T0W9	1011 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	C12orf60	Q5U649	245 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	KIF1BP	Q96EK5	621 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	BOLA2	Q9H3K6	86 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	ATP8A2	Q9NTI2	1148 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	PAG1	Q9NWQ8	432 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	ZNF214	Q9UL59	606 aa	Predicted RBP	13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	PPP1R9A	Q9ULJ8	1098 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	ADAMTS5	Q9UNA0	930 aa		13.26	□□□□□ -0.29
CMC2-223	ENST00000570195	MYH8	P13535	1937 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	PARP14	Q460N5	1801 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	ADAMTS4	O75173	837 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	FAAP100	Q0VG06	881 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	GRIN2C	Q14957	1233 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	C16orf86	Q6ZW13	317 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	AMOTL1	Q8IY63	956 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	STARD7	Q9NQZ5	370 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	CNPY2	Q9Y2B0	182 aa		13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	DIS3	Q9Y2L1	958 aa	Known RBP	13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	COL11A1	P12107	1806 aa	Predicted RBP	13.25	□□□□□ -0.29
CMC2-223	ENST00000570195	TTC28	Q96AY4	2481 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	ROBO3	Q96MS0	1386 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	SYNRG	Q9UMZ2	1314 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	TMEM265	A0A087WTH1	108 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	DCDC2C	A8MYV0	355 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	DNAJB2	P25686	324 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	SLC4A3	P48751	1232 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	ACLY	P53396	1101 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	USP38	Q8NB14	1042 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	REPS2	Q8NFH8	660 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	NUP88	Q99567	741 aa	Predicted RBP	13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	KANSL2	Q9H9L4	492 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	GOPC	Q9HD26	462 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	SLC4A4	Q9Y6R1	1079 aa		13.24	□□□□□ -0.29
CMC2-223	ENST00000570195	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.23	□□□□□ -0.29

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