RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 RIOX1Q9H6W3 641 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 GPBP1L1Q9HC44 474 aaPredicted RBP10.56□□□□□ -0.72
EDC3-218ENST00000570138 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
EDC3-218ENST00000570138 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 RCOR1Q9UKL0 485 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 PCNTO95613 3336 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 BTBD18B2RXH4 712 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 F5H6K3 240 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 KLRC3Q07444 240 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 CCDC96Q2M329 555 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 PRAMEF18Q5VWM3 479 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 TTBK2Q6IQ55 1244 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 DIS3L2Q8IYB7 885 aaKnown RBP10.55□□□□□ -0.72
EDC3-218ENST00000570138 ACER1Q8TDN7 264 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 DCAF4Q8WV16 495 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 LEO1Q8WVC0 666 aaPredicted RBP10.55□□□□□ -0.72
EDC3-218ENST00000570138 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
EDC3-218ENST00000570138 USP28Q96RU2 1077 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 PHF20Q9BVI0 1012 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 SCAND2PQ9GZW5 306 aaPredicted RBP10.55□□□□□ -0.72
EDC3-218ENST00000570138 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 GGA3Q9NZ52 723 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 CFAP45Q9UL16 551 aa10.55□□□□□ -0.72
EDC3-218ENST00000570138 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
EDC3-218ENST00000570138 ECM29Q5VYK3 1845 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 NDUFB10O96000 172 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 NLRP5P59047 1200 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 CEBPZQ03701 1054 aaKnown RBP10.54□□□□□ -0.72
EDC3-218ENST00000570138 GNL2Q13823 731 aaKnown RBP10.54□□□□□ -0.72
EDC3-218ENST00000570138 KLHL40Q2TBA0 621 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 GPATCH4Q5T3I0 446 aaKnown RBP10.54□□□□□ -0.72
EDC3-218ENST00000570138 KCTD1Q719H9 257 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 GMCL1P1Q8NEA9 526 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 GPT2Q8TD30 523 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 HOOK2Q96ED9 719 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 L3MBTL3Q96JM7 780 aaPredicted RBP10.54□□□□□ -0.72
EDC3-218ENST00000570138 SPATA32Q96LK8 384 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 PIGSQ96S52 555 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 ZNF341Q9BYN7 854 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 FOXP1Q9H334 677 aaPredicted RBP10.54□□□□□ -0.72
EDC3-218ENST00000570138 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 GINM1Q9NU53 330 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 RTEL1Q9NZ71 1219 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 ZNF112Q9UJU3 913 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 SYNPO2Q9UMS6 1093 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 TMX2Q9Y320 296 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 PPP2R3BQ9Y5P8 575 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
EDC3-218ENST00000570138 STXBP3O00186 592 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 RAD21O60216 631 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 CTNND1O60716 968 aaKnown RBP10.53□□□□□ -0.72
EDC3-218ENST00000570138 ASNSP08243 561 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 KRT2P35908 639 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 SLC16A2P36021 539 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 SLC1A4P43007 532 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 UBE2HP62256 183 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 NR5A1Q13285 461 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 NPY5RQ15761 445 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 DCAF15Q66K64 600 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 WWC2Q6AWC2 1192 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 NOSTRINQ8IVI9 506 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 ADGRF4Q8IZF3 695 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 GPKOWQ92917 476 aaPredicted RBP eCLIP10.53□□□□□ -0.72
EDC3-218ENST00000570138 GMCL1Q96IK5 515 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 FTOQ9C0B1 505 aaKnown RBP eCLIP10.53□□□□□ -0.72
EDC3-218ENST00000570138 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.53□□□□□ -0.72
EDC3-218ENST00000570138 CLIC4Q9Y696 253 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 ELP1O95163 1332 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 PITPNM2Q9BZ72 1349 aa10.53□□□□□ -0.72
EDC3-218ENST00000570138 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 GLTPD2A6NH11 291 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 MBD3O95983 291 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 BMP3P12645 472 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 CALML3P27482 149 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 INPP5BP32019 993 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 ECE1P42892 770 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 APLP1P51693 650 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 SUPT20HL1Q3ZLR7 823 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 KIAA1755Q5JYT7 1200 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 ANO1Q5XXA6 986 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 USP50Q70EL3 339 aaPredicted RBP10.52□□□□□ -0.73
EDC3-218ENST00000570138 HEATR3Q7Z4Q2 680 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 CCDC84Q86UT8 332 aaPredicted RBP10.52□□□□□ -0.73
EDC3-218ENST00000570138 HOMER1Q86YM7 354 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 FAM177A1Q8N128 213 aaPredicted RBP10.52□□□□□ -0.73
EDC3-218ENST00000570138 DCPSQ96C86 337 aaKnown RBP10.52□□□□□ -0.73
EDC3-218ENST00000570138 MTMR8Q96EF0 704 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 NUP88Q99567 741 aaPredicted RBP10.52□□□□□ -0.73
EDC3-218ENST00000570138 BRMS1Q9HCU9 246 aa10.52□□□□□ -0.73
EDC3-218ENST00000570138 BARHL2Q9NY43 387 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms