RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 MRM1Q6IN84 353 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 SLC23A3Q6PIS1 610 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 SPOCD1Q6ZMY3 1216 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 SPATC1Q76KD6 591 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 NLRC3Q7RTR2 1065 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 KSR1Q8IVT5 923 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 SMYD4Q8IYR2 804 aaPredicted RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 PLD6Q8N2A8 252 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 TAB3Q8N5C8 712 aaPredicted RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 KCT2Q8NC54 265 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 GPATCH3Q96I76 525 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 FANCD2OSQ96PS1 177 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 SLC38A3Q99624 504 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 WNT10AQ9GZT5 417 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 CNNM2Q9H8M5 875 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 MBNL3Q9NUK0 354 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 FAM53CQ9NYF3 392 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 PCOLCE2Q9UKZ9 415 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 SNX11Q9Y5W9 270 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 KDM2BQ8NHM5 1336 aa5.3□□□□□ -1.56
UBR1-211ENST00000569971 CDC45O75419 566 aa5.3□□□□□ -1.56
UBR1-211ENST00000569971 RING1Q06587 406 aa5.3□□□□□ -1.56
UBR1-211ENST00000569971 CDCP2Q5VXM1 449 aa5.3□□□□□ -1.56
UBR1-211ENST00000569971 PI4K2BQ8TCG2 481 aa5.3□□□□□ -1.56
UBR1-211ENST00000569971 ACSF2Q96CM8 615 aaPredicted RBP5.3□□□□□ -1.56
UBR1-211ENST00000569971 ADAM30Q9UKF2 790 aa5.3□□□□□ -1.56
UBR1-211ENST00000569971 TNFRSF10CO14798 259 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 POLR2BP30876 1174 aaKnown RBP5.29□□□□□ -1.56
UBR1-211ENST00000569971 ERVK-24P63145 666 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 SSRP1Q08945 709 aaKnown RBP5.29□□□□□ -1.56
UBR1-211ENST00000569971 CDK5R2Q13319 367 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 PTPROQ16827 1216 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 ZBTB37Q5TC79 503 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 VHLLQ6RSH7 139 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 HOMER1Q86YM7 354 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.29□□□□□ -1.56
UBR1-211ENST00000569971 APPBP2Q92624 585 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 FAM84AQ96KN4 292 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 DISC1Q9NRI5 854 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 TJP2Q9UDY2 1190 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 ZMYM5Q9UJ78 669 aa5.29□□□□□ -1.56
UBR1-211ENST00000569971 FANCGO15287 622 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 RAG1P15918 1043 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 GYS2P54840 703 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 OXCT1P55809 520 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 BNIP3Q12983 259 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 NCAPHQ15003 741 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 GNPTABQ3T906 1256 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 RNF187Q5TA31 235 aaPredicted RBP5.28□□□□□ -1.56
UBR1-211ENST00000569971 KIAA1211LQ6NV74 962 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 FILIP1Q7Z7B0 1213 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 MCATQ8IVS2 390 aaKnown RBP5.28□□□□□ -1.56
UBR1-211ENST00000569971 RNF214Q8ND24 703 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 LRRN4CLQ8ND94 238 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 FAM13CQ8NE31 585 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 THAP3Q8WTV1 239 aaPredicted RBP5.28□□□□□ -1.56
UBR1-211ENST00000569971 DUSP23Q9BVJ7 150 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 PHAXQ9H814 394 aaKnown RBP5.28□□□□□ -1.56
UBR1-211ENST00000569971 IFT57Q9NWB7 429 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 TMEM260Q9NX78 707 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 ADAMTS6Q9UKP5 1117 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
UBR1-211ENST00000569971 IGF2BP3O00425 579 aaKnown RBP eCLIP5.27□□□□□ -1.57
UBR1-211ENST00000569971 HCLS1P14317 486 aaPredicted RBP5.27□□□□□ -1.57
UBR1-211ENST00000569971 NTF4P34130 210 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 SLC7A5Q01650 507 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 MESP2Q0VG99 397 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 TTLL4Q14679 1199 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 AOC3Q16853 763 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 TKFCQ3LXA3 575 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 C2orf27AQ580R0 203 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 C16orf86Q6ZW13 317 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 EEPD1Q7L9B9 569 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 KIAA0907Q7Z7F0 614 aaPredicted RBP5.27□□□□□ -1.57
UBR1-211ENST00000569971 ZSWIM9Q86XI8 627 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 HID1Q8IV36 788 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 JMYQ8N9B5 988 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 FAM181AQ8N9Y4 354 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
UBR1-211ENST00000569971 ZNF507Q8TCN5 953 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 ASB11Q8WXH4 323 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 KLHL6Q8WZ60 621 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 TMEM87BQ96K49 555 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 PPP1R16BQ96T49 567 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 KIF2CQ99661 725 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 FBRSQ9HAH7 460 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 LGR6Q9HBX8 967 aa5.27□□□□□ -1.57
UBR1-211ENST00000569971 ZNF214Q9UL59 606 aaPredicted RBP5.27□□□□□ -1.57
UBR1-211ENST00000569971 PPP1R12AO14974 1030 aaPredicted RBP5.26□□□□□ -1.57
UBR1-211ENST00000569971 TSPAN15O95858 294 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 NEFMP07197 916 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 FAM153BP0C7A2 387 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 YARSP54577 528 aaKnown RBP5.26□□□□□ -1.57
UBR1-211ENST00000569971 ZNF124Q15973 351 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 NKG7Q16617 165 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 SLC6A19Q695T7 634 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 UBE3DQ7Z6J8 389 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 TMEM192Q8IY95 271 aa5.26□□□□□ -1.57
UBR1-211ENST00000569971 PHACTR4Q8IZ21 702 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms