RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 KIF5BP33176 963 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
NUP93-220ENST00000569842 SPRYD7Q5W111 196 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 STAG2Q8N3U4 1231 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 LPAR1Q92633 364 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 GTF3C6Q969F1 213 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 TMOD4Q9NZQ9 345 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 ST3GAL1Q11201 340 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 BECN1Q14457 450 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 SH3D19Q5HYK7 790 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 FAM83BQ5T0W9 1011 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 RASAL3Q86YV0 1011 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 A0A0G2JLL6 359 aaPredicted RBP14.37□□□□□ -0.11
NUP93-220ENST00000569842 BMP3P12645 472 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 VCAM1P19320 739 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 SNAPC2Q13487 334 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 ASPRV1Q53RT3 343 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 PRRT2Q7Z6L0 340 aaPredicted RBP14.37□□□□□ -0.11
NUP93-220ENST00000569842 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
NUP93-220ENST00000569842 NID2Q14112 1375 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 PALM3A6NDB9 673 aaPredicted RBP14.36□□□□□ -0.11
NUP93-220ENST00000569842 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
NUP93-220ENST00000569842 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
NUP93-220ENST00000569842 C12orf42Q96LP6 360 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 RBM28Q9NW13 759 aaKnown RBP14.36□□□□□ -0.11
NUP93-220ENST00000569842 CCDC196A0A1B0GTZ2 297 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 KLRF2D3W0D1 207 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 DTNBO60941 627 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 PLEKHA8P1O95397 391 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 PPP2R5BQ15173 497 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
NUP93-220ENST00000569842 TTBK2Q6IQ55 1244 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 GADL1Q6ZQY3 521 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
NUP93-220ENST00000569842 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
NUP93-220ENST00000569842 TMEM232C9JQI7 657 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 CPLX1O14810 134 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
NUP93-220ENST00000569842 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 CPVLQ9H3G5 476 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 RPAP3Q9H6T3 665 aaPredicted RBP14.35□□□□□ -0.11
NUP93-220ENST00000569842 DHX16O60231 1041 aaKnown RBP14.35□□□□□ -0.11
NUP93-220ENST00000569842 PPFIA3O75145 1194 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 GTF2A2P52657 109 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 UBA5Q9GZZ9 404 aa14.35□□□□□ -0.11
NUP93-220ENST00000569842 SLC10A3P09131 477 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 SLC16A2P36021 539 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 GNAQP50148 359 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 IKQ13123 557 aaPredicted RBP14.34□□□□□ -0.11
NUP93-220ENST00000569842 GRM1Q13255 1194 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 TREML2Q5T2D2 321 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 SRBD1Q8N5C6 995 aaKnown RBP14.34□□□□□ -0.11
NUP93-220ENST00000569842 CCDC102AQ96A19 550 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 TANGO6Q9C0B7 1094 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 SLC4A3P48751 1232 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 CUL4AQ13619 759 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 MOGSQ13724 837 aa14.34□□□□□ -0.11
NUP93-220ENST00000569842 FASTKD5Q7L8L6 764 aaKnown RBP14.34□□□□□ -0.11
NUP93-220ENST00000569842 PROCA1Q8NCQ7 364 aaPredicted RBP14.34□□□□□ -0.11
NUP93-220ENST00000569842 FAM155AB1AL88 458 aaPredicted RBP14.33□□□□□ -0.11
NUP93-220ENST00000569842 CTDNEP1O95476 244 aa14.33□□□□□ -0.11
NUP93-220ENST00000569842 CETPP11597 493 aa14.33□□□□□ -0.11
NUP93-220ENST00000569842 NTRK3Q16288 839 aa14.33□□□□□ -0.11
NUP93-220ENST00000569842 CYP4F22Q6NT55 531 aa14.33□□□□□ -0.11
NUP93-220ENST00000569842 CPLX2Q6PUV4 134 aaKnown RBP14.33□□□□□ -0.11
NUP93-220ENST00000569842 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.11
NUP93-220ENST00000569842 CCL15-CCL14A0A0B4J2E2 113 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 CCL15Q16663 113 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 DEFB115Q30KQ5 88 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
NUP93-220ENST00000569842 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 PHKBQ93100 1093 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 FBXO28Q9NVF7 368 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 RASSF10A6NK89 507 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
NUP93-220ENST00000569842 STAT2P52630 851 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 FUT2Q10981 343 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 BRI3BPQ8WY22 251 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 VAT1LQ9HCJ6 419 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
NUP93-220ENST00000569842 FLOT1O75955 427 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 IFNAR1P17181 557 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 HTRA3P83110 453 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 NSUN7Q8NE18 718 aaKnown RBP14.32□□□□□ -0.12
NUP93-220ENST00000569842 PIBF1Q8WXW3 757 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 AGTPBP1Q9UPW5 1226 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 PTPRFP10586 1907 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L15C9J2P7 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L13C9JLJ4 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L11C9JVI0 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L18D6R9N7 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L22D6RA61 530 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms