RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 SRBD1Q8N5C6 995 aaKnown RBP22.95■■□□□ 1.27
SCRT1-201ENST00000569446 NOC4LQ9BVI4 516 aaKnown RBP22.95■■□□□ 1.27
SCRT1-201ENST00000569446 RSPH14Q9UHP6 348 aa22.95■■□□□ 1.27
SCRT1-201ENST00000569446 WNT7AO00755 349 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 IBSPP21815 317 aaPredicted RBP22.95■■□□□ 1.26
SCRT1-201ENST00000569446 MEX3CQ5U5Q3 659 aaKnown RBP22.95■■□□□ 1.26
SCRT1-201ENST00000569446 TC2NQ8N9U0 490 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 STAG1Q8WVM7 1258 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 NLRC4Q9NPP4 1024 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 HDAC6Q9UBN7 1215 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 CALM1P0DP23 149 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 CALM2P0DP24 149 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 CALM3P0DP25 149 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 CCDC40Q4G0X9 1142 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 C3orf67Q6ZVT6 689 aa22.95■■□□□ 1.26
SCRT1-201ENST00000569446 NAPGQ99747 312 aaPredicted RBP22.95■■□□□ 1.26
SCRT1-201ENST00000569446 EFCAB8A8MWE9 144 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 RPN1P04843 607 aaKnown RBP22.94■■□□□ 1.26
SCRT1-201ENST00000569446 RAD9BQ6WBX8 426 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 CALML4Q96GE6 196 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 SEPT11Q9NVA2 429 aaKnown RBP22.94■■□□□ 1.26
SCRT1-201ENST00000569446 CXCR5P32302 372 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 RBM28Q9NW13 759 aaKnown RBP22.94■■□□□ 1.26
SCRT1-201ENST00000569446 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
SCRT1-201ENST00000569446 CACNB1Q02641 598 aaPredicted RBP22.94■■□□□ 1.26
SCRT1-201ENST00000569446 NELFCDQ8IXH7 590 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 LRRC47Q8N1G4 583 aaKnown RBP22.94■■□□□ 1.26
SCRT1-201ENST00000569446 FERMT2Q96AC1 680 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 FAM107BQ9H098 131 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 MINPP1Q9UNW1 487 aa22.94■■□□□ 1.26
SCRT1-201ENST00000569446 A0A087X0B3 334 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 GABPB1Q06547 395 aaPredicted RBP22.93■■□□□ 1.26
SCRT1-201ENST00000569446 LRRC41Q15345 812 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 TYW1BQ6NUM6 668 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 TEX11Q8IYF3 940 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 CHP1Q99653 195 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 CALML3P27482 149 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 COPB1P53618 953 aaKnown RBP22.93■■□□□ 1.26
SCRT1-201ENST00000569446 ACBD3Q9H3P7 528 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 KANSL2Q9H9L4 492 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 RMND1Q9NWS8 449 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 PRDM4Q9UKN5 801 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 SLIT1O75093 1534 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 FAM208AQ9UK61 1670 aaKnown RBP22.93■■□□□ 1.26
SCRT1-201ENST00000569446 CTR9Q6PD62 1173 aa22.93■■□□□ 1.26
SCRT1-201ENST00000569446 BMP15O95972 392 aa22.92■■□□□ 1.26
SCRT1-201ENST00000569446 ITPK1Q13572 414 aa22.92■■□□□ 1.26
SCRT1-201ENST00000569446 KLRF2D3W0D1 207 aa22.92■■□□□ 1.26
SCRT1-201ENST00000569446 LONRF2Q1L5Z9 754 aa22.92■■□□□ 1.26
SCRT1-201ENST00000569446 TACC3Q9Y6A5 838 aa22.92■■□□□ 1.26
SCRT1-201ENST00000569446 UFL1O94874 794 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 SPAG1Q07617 926 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 CLEC10AQ8IUN9 316 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 REXO1L1PQ8IX06 675 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 GSPT2Q8IYD1 628 aaKnown RBP22.91■■□□□ 1.26
SCRT1-201ENST00000569446 FAM84BQ96KN1 310 aaPredicted RBP22.91■■□□□ 1.26
SCRT1-201ENST00000569446 NFAT5O94916 1531 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 CYP26C1Q6V0L0 522 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 CALCOCO1Q9P1Z2 691 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 HPSEQ9Y251 543 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 SMCO2A6NFE2 343 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 PRCPP42785 496 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 CEP112Q8N8E3 955 aa22.91■■□□□ 1.26
SCRT1-201ENST00000569446 SF3A3Q12874 501 aaKnown RBP eCLIP22.9■■□□□ 1.26
SCRT1-201ENST00000569446 SYCP1Q15431 976 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 BPIFA3Q9BQP9 254 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.9■■□□□ 1.26
SCRT1-201ENST00000569446 INTS13Q9NVM9 706 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 PARP3Q9Y6F1 533 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 ST5P78524 1137 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 KIF5AQ12840 1032 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 CABP7Q86V35 215 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 C2CD5Q86YS7 1000 aa22.9■■□□□ 1.26
SCRT1-201ENST00000569446 RTCBQ9Y3I0 505 aaKnown RBP22.9■■□□□ 1.26
SCRT1-201ENST00000569446 TCRBV5S4A2TA0A5A2 114 aa22.89■■□□□ 1.26
SCRT1-201ENST00000569446 PARP1P09874 1014 aaKnown RBP22.89■■□□□ 1.26
SCRT1-201ENST00000569446 TXNRD3Q86VQ6 643 aa22.89■■□□□ 1.26
SCRT1-201ENST00000569446 GPR161Q8N6U8 529 aaKnown RBP22.89■■□□□ 1.26
SCRT1-201ENST00000569446 GJA10Q969M2 543 aa22.89■■□□□ 1.26
SCRT1-201ENST00000569446 DCP1AQ9NPI6 582 aaPredicted RBP22.89■■□□□ 1.26
SCRT1-201ENST00000569446 EPN1Q9Y6I3 576 aaPredicted RBP22.89■■□□□ 1.26
SCRT1-201ENST00000569446 RGPD2P0DJD1 1756 aa22.89■■□□□ 1.26
SCRT1-201ENST00000569446 SETD1AO15047 1707 aaKnown RBP22.89■■□□□ 1.26
SCRT1-201ENST00000569446 TCP10Q12799 353 aa22.89■■□□□ 1.25
SCRT1-201ENST00000569446 TBC1D9BQ66K14 1250 aa22.89■■□□□ 1.25
SCRT1-201ENST00000569446 TTC19Q6DKK2 380 aaPredicted RBP22.89■■□□□ 1.25
SCRT1-201ENST00000569446 NOP2P46087 812 aaKnown RBP22.89■■□□□ 1.25
SCRT1-201ENST00000569446 SMARCC1Q92922 1105 aaPredicted RBP22.89■■□□□ 1.25
SCRT1-201ENST00000569446 COA7Q96BR5 231 aa22.89■■□□□ 1.25
SCRT1-201ENST00000569446 ZNF446Q9NWS9 450 aa22.89■■□□□ 1.25
SCRT1-201ENST00000569446 ACTN4O43707 911 aaKnown RBP22.88■■□□□ 1.25
SCRT1-201ENST00000569446 TMTC3Q6ZXV5 915 aa22.88■■□□□ 1.25
SCRT1-201ENST00000569446 GSDMAQ96QA5 445 aa22.88■■□□□ 1.25
SCRT1-201ENST00000569446 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
SCRT1-201ENST00000569446 ADGRG1Q9Y653 693 aa22.88■■□□□ 1.25
SCRT1-201ENST00000569446 MORC2Q9Y6X9 1032 aaPredicted RBP22.88■■□□□ 1.25
SCRT1-201ENST00000569446 PHLPP2Q6ZVD8 1323 aa22.88■■□□□ 1.25
SCRT1-201ENST00000569446 ABL1P00519 1130 aa22.88■■□□□ 1.25
SCRT1-201ENST00000569446 TMTC1Q8IUR5 882 aa22.88■■□□□ 1.25
SCRT1-201ENST00000569446 IFT81Q8WYA0 676 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms