RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SRP68Q9UHB9 627 aaKnown RBP10.16□□□□□ -0.78
CCDC113-205ENST00000569374 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 NRXN2Q9P2S2 1712 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 DIAPH1O60610 1272 aaKnown RBP10.15□□□□□ -0.78
CCDC113-205ENST00000569374 PTPRAP18433 802 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 POLD1P28340 1107 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 CABP4P57796 275 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 CTBSQ01459 385 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 LRRC14Q15048 493 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 FAM35AQ86V20 835 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 NKD1Q969G9 470 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 PHACTR3Q96KR7 559 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 POP1Q99575 1024 aaKnown RBP10.15□□□□□ -0.78
CCDC113-205ENST00000569374 CYP8B1Q9UNU6 501 aa10.15□□□□□ -0.78
CCDC113-205ENST00000569374 C10orf71Q711Q0 1435 aa10.15□□□□□ -0.79
CCDC113-205ENST00000569374 ERVV-2B6SEH9 535 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 U2SURPO15042 1029 aaKnown RBP10.14□□□□□ -0.79
CCDC113-205ENST00000569374 RNMTO43148 476 aaKnown RBP10.14□□□□□ -0.79
CCDC113-205ENST00000569374 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
CCDC113-205ENST00000569374 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 HNRNPUQ00839 825 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC113-205ENST00000569374 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 DNAJC10Q8IXB1 793 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 UBP1Q9NZI7 540 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 DACH1Q9UI36 760 aa10.14□□□□□ -0.79
CCDC113-205ENST00000569374 R3HCC1Q9Y3T6 440 aaKnown RBP10.14□□□□□ -0.79
CCDC113-205ENST00000569374 CNTNAP4Q9C0A0 1308 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 TLDC2A0PJX2 215 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 TFE3P19532 575 aaPredicted RBP10.13□□□□□ -0.79
CCDC113-205ENST00000569374 GARTP22102 1010 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
CCDC113-205ENST00000569374 PCDH1Q08174 1060 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 AMOTQ4VCS5 1084 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 ELMSAN1Q6PJG2 1045 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 CACTIN-AS1Q8N1I8 211 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 PLD4Q96BZ4 506 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 TRIM55Q9BYV6 548 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 MUC3BQ9H195 1237 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 ZNF408Q9H9D4 720 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 SLC52A2Q9HAB3 445 aa10.13□□□□□ -0.79
CCDC113-205ENST00000569374 NSFL1CQ9UNZ2 370 aaKnown RBP10.13□□□□□ -0.79
CCDC113-205ENST00000569374 KCNQ3O43525 872 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 B3GALT4O96024 378 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 MMP10P09238 476 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 GYS1P13807 737 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 CPB1P15086 417 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 NME2P22392 152 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 PRKAR2BP31323 418 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 DDR1Q08345 913 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 FAAP100Q0VG06 881 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 GPR162Q16538 588 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 AKAP4Q5JQC9 854 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 INTS5Q6P9B9 1019 aaKnown RBP10.12□□□□□ -0.79
CCDC113-205ENST00000569374 SLITRK4Q8IW52 837 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 MRFAP1L1Q96HT8 127 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 CCDC88AQ3V6T2 1871 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
CCDC113-205ENST00000569374 ZBED9Q6R2W3 1325 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 SBF1O95248 1867 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 ADH6P28332 368 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 CWF19L2Q2TBE0 894 aaKnown RBP10.11□□□□□ -0.79
CCDC113-205ENST00000569374 SCARA3Q6AZY7 606 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 IL17REQ8NFR9 667 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 GATAD2BQ8WXI9 593 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 LRRC3Q9BY71 257 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 SLC6A14Q9UN76 642 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 ZBTB1Q9Y2K1 713 aa10.11□□□□□ -0.79
CCDC113-205ENST00000569374 TNRC6CQ9HCJ0 1690 aaKnown RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 GPR25O00155 361 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 PAGE1O75459 146 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 MX2P20592 715 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 PIP4K2AP48426 406 aaPredicted RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 PCBP4P57723 403 aaKnown RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 MPP2Q14168 576 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 BMS1Q14692 1282 aaKnown RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 TNNI3KQ59H18 835 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 VWA5B2Q8N398 1253 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 NANOS1Q8WY41 292 aaKnown RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 MKL1Q969V6 931 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 SRRTQ9BXP5 876 aaKnown RBP10.1□□□□□ -0.79
CCDC113-205ENST00000569374 ADAM19Q9H013 955 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 SIRPGQ9P1W8 387 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 TIAM2Q8IVF5 1701 aa10.1□□□□□ -0.79
CCDC113-205ENST00000569374 USP42Q9H9J4 1324 aaKnown RBP10.09□□□□□ -0.79
CCDC113-205ENST00000569374 BPNT1O95861 308 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 ARAFP10398 606 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 ADH7P40394 386 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 ZNF165P49910 485 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 RALBP1Q15311 655 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 LLGL2Q6P1M3 1020 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 ANKS3Q6ZW76 656 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms