RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 MKL1Q969V6 931 aa11.6□□□□□ -0.55
CLN6-209ENST00000569336 ARMC5Q96C12 935 aa11.6□□□□□ -0.55
CLN6-209ENST00000569336 CNNM2Q9H8M5 875 aa11.6□□□□□ -0.55
CLN6-209ENST00000569336 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
CLN6-209ENST00000569336 STX8Q9UNK0 236 aa11.6□□□□□ -0.55
CLN6-209ENST00000569336 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
CLN6-209ENST00000569336 ALPK3Q96L96 1907 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 F5H6K3 240 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 PRKCZQ05513 592 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 KLRC3Q07444 240 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 IRF5Q13568 498 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 TXNRD2Q9NNW7 524 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 LRRC37A2A6NM11 1700 aa11.59□□□□□ -0.55
CLN6-209ENST00000569336 SGSM2O43147 1006 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 NDUFB10O96000 172 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 GRK4P32298 578 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 DSG3P32926 999 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 COPB2P35606 906 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 FLT3LGP49771 235 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 CCDC178Q5BJE1 867 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 KIAA1211Q6ZU35 1233 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 IQCA1Q86XH1 822 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 TBC1D10CQ8IV04 446 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
CLN6-209ENST00000569336 PXYLP1Q8TE99 480 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 ZNF333Q96JL9 665 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 KRT23Q9C075 422 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
CLN6-209ENST00000569336 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
CLN6-209ENST00000569336 NEDD4P46934 1319 aa11.58□□□□□ -0.56
CLN6-209ENST00000569336 ADCY3O60266 1144 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 STAT2P52630 851 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 UBXN2AP68543 259 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 TRDNQ13061 729 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 WDR78Q5VTH9 848 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
CLN6-209ENST00000569336 PLEKHH3Q7Z736 793 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 TRMT44Q8IYL2 757 aaKnown RBP11.57□□□□□ -0.56
CLN6-209ENST00000569336 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
CLN6-209ENST00000569336 SHCBP1Q8NEM2 672 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 TMEM106CQ9BVX2 250 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 SPATC1LQ9H0A9 340 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
CLN6-209ENST00000569336 FEM1BQ9UK73 627 aa11.57□□□□□ -0.56
CLN6-209ENST00000569336 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
CLN6-209ENST00000569336 NMT2O60551 498 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 CDC45O75419 566 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 CNMDO75829 334 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 FDX1P10109 184 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 TOP1P11387 765 aaKnown RBP11.56□□□□□ -0.56
CLN6-209ENST00000569336 BMP3P12645 472 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 RGS2P41220 211 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 SLC1A4P43007 532 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
CLN6-209ENST00000569336 PLS1Q14651 629 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 GPR142Q7Z601 462 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 FAM160B2Q86V87 743 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 DCAF4Q8WV16 495 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 TTC14Q96N46 770 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 APBA2Q99767 749 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 PORCNQ9H237 461 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 IL25Q9H293 177 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 MROH8Q9H579 483 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 IL17RBQ9NRM6 502 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 BTBD7Q9P203 1132 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 GABRQQ9UN88 632 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
CLN6-209ENST00000569336 MYH7BA7E2Y1 1941 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 VWA5AO00534 786 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 STRNO43815 780 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 KDM4AO75164 1064 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 SLC25A27O95847 323 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 HMGCRP04035 888 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
CLN6-209ENST00000569336 NOVP48745 357 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 FXR1P51114 621 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLN6-209ENST00000569336 RALYLQ86SE5 291 aaKnown RBP11.55□□□□□ -0.56
CLN6-209ENST00000569336 CHURC1Q8WUH1 139 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 NUP88Q99567 741 aaPredicted RBP11.55□□□□□ -0.56
CLN6-209ENST00000569336 ESYT1Q9BSJ8 1104 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
CLN6-209ENST00000569336 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms