RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 FLOT1O75955 427 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 BMP3P12645 472 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 SLC1A4P43007 532 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 ANAPC15P60006 121 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 FGD1P98174 961 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
CNOT1-217ENST00000569263 NFXL1Q6ZNB6 911 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 RLFQ13129 1914 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 COL11A1P12107 1806 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 CCDC69A6NI79 296 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 TLR2O60603 784 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 HERVK_113P62684 666 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 COL9A3Q14050 684 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
CNOT1-217ENST00000569263 CPA4Q9UI42 421 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
CNOT1-217ENST00000569263 MYPNQ86TC9 1320 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 PDHBP11177 359 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 CPA1P15085 419 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 RPS6KB1P23443 525 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 COG2Q14746 738 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 KCTD1Q719H9 257 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 IGDCC4Q8TDY8 1250 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 SLF1Q9BQI6 1058 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 PAGR1Q9BTK6 254 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 R3HDMLQ9H3Y0 253 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 LY9Q9HBG7 655 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 FBXO28Q9NVF7 368 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 FEM1BQ9UK73 627 aa15.28■□□□□ 0.04
CNOT1-217ENST00000569263 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
CNOT1-217ENST00000569263 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.04
CNOT1-217ENST00000569263 TMEM232C9JQI7 657 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 GPR25O00155 361 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
CNOT1-217ENST00000569263 LIFRP42702 1097 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 STAT2P52630 851 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 EXOSC10Q01780 885 aaKnown RBP15.27■□□□□ 0.04
CNOT1-217ENST00000569263 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 C22orf23Q9BZE7 217 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 SENP2Q9HC62 589 aa15.27■□□□□ 0.04
CNOT1-217ENST00000569263 GPHNQ9NQX3 736 aaPredicted RBP15.27■□□□□ 0.04
CNOT1-217ENST00000569263 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.04
CNOT1-217ENST00000569263 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
CNOT1-217ENST00000569263 SNHG28P0DPA3 235 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 DSG3P32926 999 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 ZNF543Q08ER8 600 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
CNOT1-217ENST00000569263 C17orf99Q6UX52 265 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 SYNE3Q6ZMZ3 975 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 Q6ZUG5 572 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 ZNF654Q8IZM8 581 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 ANKRD13CQ8N6S4 541 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 PRPF38AQ8NAV1 312 aaKnown RBP15.26■□□□□ 0.03
CNOT1-217ENST00000569263 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 NUP133Q8WUM0 1156 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 KIFC2Q96AC6 838 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 ATG4CQ96DT6 458 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 BACH2Q9BYV9 841 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 UPF3BQ9BZI7 483 aaKnown RBP15.26■□□□□ 0.03
CNOT1-217ENST00000569263 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 PPP1R9AQ9ULJ8 1098 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 MGAMO43451 1857 aa15.26■□□□□ 0.03
CNOT1-217ENST00000569263 FKTNO75072 461 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 DDAH1O94760 285 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 BCRP11274 1271 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 LBX1P52954 281 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 SP3Q02447 781 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 NOM1Q5C9Z4 860 aaKnown RBP15.25■□□□□ 0.03
CNOT1-217ENST00000569263 LBX2Q6XYB7 198 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 MB21D1Q8N884 522 aa15.25■□□□□ 0.03
CNOT1-217ENST00000569263 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
CNOT1-217ENST00000569263 CASP8AP2Q9UKL3 1982 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 MYH6P13533 1939 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 PLA2G6O60733 806 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 GOLGA8HP0CJ92 632 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 KIF22Q14807 665 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 SYDE2Q5VT97 1194 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 CTCFLQ8NI51 663 aaPredicted RBP15.24■□□□□ 0.03
CNOT1-217ENST00000569263 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
CNOT1-217ENST00000569263 BRF1Q92994 677 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 MYL10Q9BUA6 226 aa15.24■□□□□ 0.03
CNOT1-217ENST00000569263 MORF4L1Q9UBU8 362 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms