RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 MKL1Q969V6 931 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 PHF20Q9BVI0 1012 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 NYAP2Q9P242 653 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 CLIC4Q9Y696 253 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 TRIM29Q14134 588 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 EARS2Q5JPH6 523 aaKnown RBP13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 SPATA32Q96LK8 384 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 GPCPD1Q9NPB8 672 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 TBC1D12O60347 775 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 ICA1Q05084 483 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 PRAMEF18Q5VWM3 479 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 BRAPQ7Z569 592 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 SPZ1Q9BXG8 430 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 RCOR1Q9UKL0 485 aa13.41□□□□□ -0.26
CCNDBP1-214ENST00000568936 ELP1O95163 1332 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 PHF20L1A8MW92 1017 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 H7C1D1 291 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 GNAQP50148 359 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 TOB1P50616 345 aaPredicted RBP13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 ZSCAN23Q3MJ62 389 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 ANGEL2Q5VTE6 544 aaKnown RBP13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 WWC2Q6AWC2 1192 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 KCTD1Q719H9 257 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 SCAND2PQ9GZW5 306 aaPredicted RBP13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 DEFB129Q9H1M3 183 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
CCNDBP1-214ENST00000568936 ECE1P42892 770 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 UBE2HP62256 183 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 KIAA1755Q5JYT7 1200 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 ACER1Q8TDN7 264 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 TNFRSF25Q93038 417 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 PIGSQ96S52 555 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 PANK2Q9BZ23 570 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.27
CCNDBP1-214ENST00000568936 SLC16A2P36021 539 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 TNNI2P48788 182 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 NOSTRINQ8IVI9 506 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
CCNDBP1-214ENST00000568936 WNT7AO00755 349 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 CAP2P40123 477 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 HOMER1Q86YM7 354 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 LINC00301Q8NCQ3 95 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 NUP88Q99567 741 aaPredicted RBP13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 F5H6K3 240 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 STXBP3O00186 592 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 LIG1P18858 919 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 NASPP49321 788 aaPredicted RBP13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 KLRC3Q07444 240 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 JMJD4Q9H9V9 463 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 CABP5Q9NP86 173 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 GGA3Q9NZ52 723 aa13.38□□□□□ -0.27
CCNDBP1-214ENST00000568936 RAD21O60216 631 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 PPP1R11O60927 126 aaPredicted RBP13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 NDUFB10O96000 172 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 TNFAIP1Q13829 316 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 PTPAQ15257 358 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 CCDC96Q2M329 555 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 SYAP1Q96A49 352 aaPredicted RBP13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
CCNDBP1-214ENST00000568936 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 KRT2P35908 639 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 BARHL2Q9NY43 387 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 M0R2N6 131 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 XBP1P17861 261 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 NLRP5P59047 1200 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 RASGRP4Q8TDF6 673 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 PCDHA7Q9UN72 937 aa13.36□□□□□ -0.27
CCNDBP1-214ENST00000568936 INPP5BP32019 993 aa13.35□□□□□ -0.27
CCNDBP1-214ENST00000568936 GPR162Q16538 588 aa13.35□□□□□ -0.27
CCNDBP1-214ENST00000568936 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
CCNDBP1-214ENST00000568936 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms