RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 ATP8B1O43520 1251 aa20.72■□□□□ 0.91
PKD1-235ENST00000568591 CTAGE1Q96RT6 745 aa20.72■□□□□ 0.91
PKD1-235ENST00000568591 NAA15Q9BXJ9 866 aaKnown RBP20.72■□□□□ 0.91
PKD1-235ENST00000568591 PP2D1A8MPX8 630 aa20.72■□□□□ 0.91
PKD1-235ENST00000568591 COPB1P53618 953 aaKnown RBP20.72■□□□□ 0.91
PKD1-235ENST00000568591 CNGA4Q8IV77 575 aa20.72■□□□□ 0.91
PKD1-235ENST00000568591 NELFBQ8WX92 580 aa20.72■□□□□ 0.91
PKD1-235ENST00000568591 FAM205AQ6ZU69 1335 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 CCDC151A5D8V7 595 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 N4BP1O75113 896 aaKnown RBP20.71■□□□□ 0.91
PKD1-235ENST00000568591 NLRP5P59047 1200 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
PKD1-235ENST00000568591 PLIN2Q99541 437 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 PMS1P54277 932 aaKnown RBP20.71■□□□□ 0.91
PKD1-235ENST00000568591 BEND6Q5SZJ8 279 aaPredicted RBP20.71■□□□□ 0.91
PKD1-235ENST00000568591 IQUBQ8NA54 791 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 NOA1Q8NC60 698 aaKnown RBP20.71■□□□□ 0.91
PKD1-235ENST00000568591 BRMS1Q9HCU9 246 aa20.71■□□□□ 0.91
PKD1-235ENST00000568591 LIMA1Q9UHB6 759 aaKnown RBP20.71■□□□□ 0.91
PKD1-235ENST00000568591 CTAGE9A4FU28 777 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 KCNJ18B7U540 433 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 PRCPP42785 496 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 PAK1Q13153 545 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 KCNJ12Q14500 433 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 TCP11X2Q5H9J9 407 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 NCAPH2Q6IBW4 605 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 PDE11AQ9HCR9 933 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 ABCB6Q9NP58 842 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 REXO2Q9Y3B8 237 aaKnown RBP20.7■□□□□ 0.9
PKD1-235ENST00000568591 MAP2K7O14733 419 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 KRT9P35527 623 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 PPP2R5BQ15173 497 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 IRF2BP1Q8IU81 584 aa20.7■□□□□ 0.9
PKD1-235ENST00000568591 FAM84BQ96KN1 310 aaPredicted RBP20.7■□□□□ 0.9
PKD1-235ENST00000568591 RBM28Q9NW13 759 aaKnown RBP20.7■□□□□ 0.9
PKD1-235ENST00000568591 SCG2P13521 617 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 VSNL1P62760 191 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 ERFEQ4G0M1 354 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 RNF216Q9NWF9 866 aaPredicted RBP20.69■□□□□ 0.9
PKD1-235ENST00000568591 SEMA3EO15041 775 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 FECHP22830 423 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 CTCFLQ8NI51 663 aaPredicted RBP20.69■□□□□ 0.9
PKD1-235ENST00000568591 BRIP1Q9BX63 1249 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 RWDD2AQ9UIY3 292 aa20.69■□□□□ 0.9
PKD1-235ENST00000568591 ITIH6Q6UXX5 1313 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 LRRC10BA6NIK2 292 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 ENC1O14682 589 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 IRX5P78411 483 aaPredicted RBP20.68■□□□□ 0.9
PKD1-235ENST00000568591 UBXN1Q04323 297 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 CT47A1Q5JQC4 288 aaPredicted RBP20.68■□□□□ 0.9
PKD1-235ENST00000568591 TYW1BQ6NUM6 668 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 HDAC6Q9UBN7 1215 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 GTPBP6O43824 516 aaPredicted RBP20.68■□□□□ 0.9
PKD1-235ENST00000568591 RPN1P04843 607 aaKnown RBP20.68■□□□□ 0.9
PKD1-235ENST00000568591 KCNQ4P56696 695 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 FAM193AP78312 1265 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
PKD1-235ENST00000568591 CALCOCO1Q9P1Z2 691 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 ADAM21Q9UKJ8 722 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 MTMR7Q9Y216 660 aa20.68■□□□□ 0.9
PKD1-235ENST00000568591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.68■□□□□ 0.9
PKD1-235ENST00000568591 BMP15O95972 392 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 FGRP09769 529 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 BRD3Q15059 726 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 SLC51AQ86UW1 340 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 CEP112Q8N8E3 955 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 NAPGQ99747 312 aaPredicted RBP20.67■□□□□ 0.9
PKD1-235ENST00000568591 TFCP2L1Q9NZI6 479 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 GUCA1BQ9UMX6 200 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 TTF2Q9UNY4 1162 aaKnown RBP20.67■□□□□ 0.9
PKD1-235ENST00000568591 LOC102724428A0A0B4J2F2 783 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 TTC26A0AVF1 554 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 PES1O00541 588 aaKnown RBP20.67■□□□□ 0.9
PKD1-235ENST00000568591 DDAH1O94760 285 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 PRDX5P30044 214 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 SIK1P57059 783 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 MECOMQ03112 1051 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 PARP10Q53GL7 1025 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 BICDL1Q6ZP65 573 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 TMTC1Q8IUR5 882 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 STAG2Q8N3U4 1231 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 C4orf32Q8N8J7 132 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 LRRC15Q8TF66 581 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 NSUN4Q96CB9 384 aaKnown RBP20.67■□□□□ 0.9
PKD1-235ENST00000568591 DCP1AQ9NPI6 582 aaPredicted RBP20.67■□□□□ 0.9
PKD1-235ENST00000568591 MINPP1Q9UNW1 487 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 MYH13Q9UKX3 1938 aa20.67■□□□□ 0.9
PKD1-235ENST00000568591 NAALADL2Q58DX5 795 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 ZNF658Q5TYW1 1059 aaPredicted RBP20.66■□□□□ 0.9
PKD1-235ENST00000568591 JAKMIP3Q5VZ66 844 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 RAB21Q9UL25 225 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 CAPN2P17655 700 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 PFKFB3Q16875 520 aaPredicted RBP20.66■□□□□ 0.9
PKD1-235ENST00000568591 RCSD1Q6JBY9 416 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 CYP26C1Q6V0L0 522 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 CCDC24Q8N4L8 307 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 MSANTD4Q8NCY6 345 aa20.66■□□□□ 0.9
PKD1-235ENST00000568591 TMEM60Q9H2L4 133 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms