RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 ADCK5Q3MIX3 580 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 NOM1Q5C9Z4 860 aaKnown RBP10.43□□□□□ -0.74
RPAP1-211ENST00000568413 TMEM67Q5HYA8 995 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 IFIT1BQ5T764 474 aaKnown RBP10.43□□□□□ -0.74
RPAP1-211ENST00000568413 SLFN13Q68D06 897 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 CATSPERGQ6ZRH7 1159 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
RPAP1-211ENST00000568413 IGDCC4Q8TDY8 1250 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 JAKMIP1Q96N16 626 aaKnown RBP10.43□□□□□ -0.74
RPAP1-211ENST00000568413 TM6SF1Q9BZW5 370 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 RPAP3Q9H6T3 665 aaPredicted RBP10.43□□□□□ -0.74
RPAP1-211ENST00000568413 KAT14Q9H8E8 782 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 UPF2Q9HAU5 1272 aaKnown RBP10.43□□□□□ -0.74
RPAP1-211ENST00000568413 HOXC10Q9NYD6 342 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
RPAP1-211ENST00000568413 HTTP42858 3142 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 NDUFB10O96000 172 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 LIFRP42702 1097 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 ANTXR2P58335 489 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 COG2Q14746 738 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 KIAA1755Q5JYT7 1200 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 CHST3Q7LGC8 479 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 LRRC47Q8N1G4 583 aaKnown RBP10.42□□□□□ -0.74
RPAP1-211ENST00000568413 PNMA1Q8ND90 353 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 GMCL1Q96IK5 515 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 PARK7Q99497 189 aaKnown RBP10.42□□□□□ -0.74
RPAP1-211ENST00000568413 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
RPAP1-211ENST00000568413 ASCC2Q9H1I8 757 aaPredicted RBP10.42□□□□□ -0.74
RPAP1-211ENST00000568413 TLR2O60603 784 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 BMP3P12645 472 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 CASTP20810 708 aaKnown RBP10.41□□□□□ -0.74
RPAP1-211ENST00000568413 SLC1A4P43007 532 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 GCLCP48506 637 aaPredicted RBP10.41□□□□□ -0.74
RPAP1-211ENST00000568413 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 SMCR8Q8TEV9 937 aaPredicted RBP10.41□□□□□ -0.74
RPAP1-211ENST00000568413 GTF3C2Q8WUA4 911 aaPredicted RBP10.41□□□□□ -0.74
RPAP1-211ENST00000568413 CHURC1Q8WUH1 139 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 P2RX7Q99572 595 aaKnown RBP10.41□□□□□ -0.74
RPAP1-211ENST00000568413 BACH2Q9BYV9 841 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 C22orf23Q9BZE7 217 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 FEM1BQ9UK73 627 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 LOC285556D6RIA3 1793 aa10.41□□□□□ -0.74
RPAP1-211ENST00000568413 MYPNQ86TC9 1320 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 RBBP6Q7Z6E9 1792 aaKnown RBP10.4□□□□□ -0.74
RPAP1-211ENST00000568413 CCDC69A6NI79 296 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 TMEM232C9JQI7 657 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 SH2B2O14492 632 aaPredicted RBP10.4□□□□□ -0.74
RPAP1-211ENST00000568413 PLA2G6O60733 806 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 FLOT1O75955 427 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 MYCP01106 439 aaPredicted RBP10.4□□□□□ -0.74
RPAP1-211ENST00000568413 CYP2C8P10632 490 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 RPS6KB1P23443 525 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 HERVK_113P62684 666 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 FGD1P98174 961 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 SP3Q02447 781 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
RPAP1-211ENST00000568413 NFXL1Q6ZNB6 911 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 CATIPQ7Z7H3 387 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 FAM160B2Q86V87 743 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 FBXL16Q8N461 479 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 PRPF38AQ8NAV1 312 aaKnown RBP10.4□□□□□ -0.74
RPAP1-211ENST00000568413 IL17RAQ96F46 866 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 ARHGAP39Q9C0H5 1083 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 EFCC1Q9HA90 598 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 LY9Q9HBG7 655 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 ISY1Q9ULR0 285 aaKnown RBP10.4□□□□□ -0.74
RPAP1-211ENST00000568413 MTMR7Q9Y216 660 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 PTPN22Q9Y2R2 807 aa10.4□□□□□ -0.74
RPAP1-211ENST00000568413 SNHG28P0DPA3 235 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 FDX1P10109 184 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 PDHBP11177 359 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 CPA1P15085 419 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 DSG3P32926 999 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 STAT2P52630 851 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
RPAP1-211ENST00000568413 CCDC96Q2M329 555 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 C17orf99Q6UX52 265 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 SYNE3Q6ZMZ3 975 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 SGMS1Q86VZ5 419 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 MB21D1Q8N884 522 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 MAP3K14Q99558 947 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
RPAP1-211ENST00000568413 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 RABGAP1Q9Y3P9 1069 aa10.39□□□□□ -0.75
RPAP1-211ENST00000568413 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
RPAP1-211ENST00000568413 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
RPAP1-211ENST00000568413 CALM1P0DP23 149 aa10.38□□□□□ -0.75
RPAP1-211ENST00000568413 CALM2P0DP24 149 aa10.38□□□□□ -0.75
RPAP1-211ENST00000568413 CALM3P0DP25 149 aa10.38□□□□□ -0.75
RPAP1-211ENST00000568413 BCRP11274 1271 aa10.38□□□□□ -0.75
RPAP1-211ENST00000568413 RBM25P49756 843 aaKnown RBP10.38□□□□□ -0.75
RPAP1-211ENST00000568413 ZNF543Q08ER8 600 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms