RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NCK2O43639 380 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 MYZAPP0CAP1 466 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 PTPREP23469 700 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 SARNPP82979 210 aaKnown RBP12.15□□□□□ -0.46
PALB2-206ENST00000568219 RASSF7Q02833 373 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 ESR2Q92731 530 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 CD163L1Q9NR16 1453 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 FANCGO15287 622 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 CEP104O60308 925 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 KCNA6P17658 529 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 DTHD1Q6ZMT9 781 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 AMOTL1Q8IY63 956 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 EHD2Q9NZN4 543 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
PALB2-206ENST00000568219 HEXIM1O94992 359 aaKnown RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 EHHADHQ08426 723 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 SCARF1Q14162 830 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 TEX2Q8IWB9 1127 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 FANCBQ8NB91 859 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 RRP36Q96EU6 259 aaKnown RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 MLXIPQ9HAP2 919 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 TSPY2A6NKD2 308 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 BMP6P22004 513 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 CTNNA1P35221 906 aaKnown RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 EZH2Q15910 746 aaKnown RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 CFAP221Q4G0U5 840 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 ADAT2Q7Z6V5 191 aaKnown RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 GSDMAQ96QA5 445 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 NHEJ1Q9H9Q4 299 aaPredicted RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 MYO1AQ9UBC5 1043 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 STK38LQ9Y2H1 464 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 SNAP23O00161 211 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 PRKAB2O43741 272 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 MMP1P03956 469 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 PAK2Q13177 524 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 CUL4BQ13620 913 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 SNCBQ16143 134 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 KCTD19Q17RG1 926 aaPredicted RBP12.14□□□□□ -0.47
PALB2-206ENST00000568219 DYMQ7RTS9 669 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 ZNF654Q8IZM8 581 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 IL17RAQ96F46 866 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
PALB2-206ENST00000568219 CPS1P31327 1500 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 LTKP29376 864 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 RAPGEF1Q13905 1077 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 ZFYVE27Q5T4F4 411 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 HIBCHQ6NVY1 386 aaPredicted RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 HEATR3Q7Z4Q2 680 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 PLBD2Q8NHP8 589 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 SPAG5Q96R06 1193 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 FAM53CQ9NYF3 392 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 STX8Q9UNK0 236 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 CHUKO15111 745 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 FTCDO95954 541 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 RPN1P04843 607 aaKnown RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 NR1D1P20393 614 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 ERVK-24P63145 666 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 CCNI2Q6ZMN8 369 aaPredicted RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 FAM114A1Q8IWE2 563 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 MYO3AQ8NEV4 1616 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 APBA1Q02410 837 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 CCDC25Q86WR0 208 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 MB21D2Q8IYB1 491 aaPredicted RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 ARL8AQ96BM9 186 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 PAIP2Q9BPZ3 127 aaKnown RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
PALB2-206ENST00000568219 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
PALB2-206ENST00000568219 SH2B2O14492 632 aaPredicted RBP12.12□□□□□ -0.47
PALB2-206ENST00000568219 BMP15O95972 392 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 ANTXR2P58335 489 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 AKNAD1Q5T1N1 836 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 RASGRP4Q8TDF6 673 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 DMGDHQ9UI17 866 aaKnown RBP12.12□□□□□ -0.47
PALB2-206ENST00000568219 UBN2Q6ZU65 1347 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 NPHP4O75161 1426 aaPredicted RBP12.12□□□□□ -0.47
PALB2-206ENST00000568219 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms