RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-209ENST00000567635 PLS1Q14651 629 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 ALX1Q15699 326 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 MCMDC2Q4G0Z9 681 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 CCDC129Q6ZRS4 1044 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 UBE2Q1Q7Z7E8 422 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 SHCBP1Q8NEM2 672 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 NEDD1Q8NHV4 660 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 TRIB2Q92519 343 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 DPF3Q92784 378 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 MKL1Q969V6 931 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 RILPL2Q969X0 211 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 ATG4CQ96DT6 458 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 APBA2Q99767 749 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 MOV10L1Q9BXT6 1211 aaKnown RBP8.23□□□□□ -1.09
SF3B3-209ENST00000567635 SPATC1LQ9H0A9 340 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 CRISPLD2Q9H0B8 497 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.23□□□□□ -1.092e-7■■■■□ 23.4
SF3B3-209ENST00000567635 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 MROH8Q9H579 483 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 MTMR4Q9NYA4 1195 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 ADAMTS5Q9UNA0 930 aa8.23□□□□□ -1.09
SF3B3-209ENST00000567635 IGKV6D-41A0A0C4DH26 115 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 F5H6K3 240 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 FARP2O94887 1054 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-209ENST00000567635 TTLL1O95922 423 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 TSPY3P0CV98 308 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 TSPY8P0CW00 308 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 PRKAR2AP13861 404 aaKnown RBP8.22□□□□□ -1.09
SF3B3-209ENST00000567635 ERCC3P19447 782 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 TFAP4Q01664 338 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 KLRC3Q07444 240 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 CACNB2Q08289 660 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-209ENST00000567635 CCL14Q16627 93 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 FAM47AQ5JRC9 791 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 FAM83BQ5T0W9 1011 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 MFSD14CQ5VZR4 134 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 DPP9Q86TI2 863 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 CEP95Q96GE4 821 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 FAM227BQ96M60 508 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 HTATIP2Q9BUP3 242 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 FBXO28Q9NVF7 368 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 SLC5A4Q9NY91 659 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 SYNPO2Q9UMS6 1093 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 TRIOBPQ9H2D6 2365 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 MCM3APO60318 1980 aa8.22□□□□□ -1.09
SF3B3-209ENST00000567635 ALPK3Q96L96 1907 aa8.21□□□□□ -1.09
SF3B3-209ENST00000567635 A0A0G2JMZ2 1700 aa8.21□□□□□ -1.09
SF3B3-209ENST00000567635 VWA5AO00534 786 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 FOXP2O15409 715 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 SLC25A27O95847 323 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 NDUFB10O96000 172 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 FGAP02671 866 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 HOXC6P09630 235 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 FCER1AP12319 257 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 SDSP20132 328 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 ADORA2AP29274 412 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 STAT3P40763 770 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 MFAP1P55081 439 aaKnown RBP8.21□□□□□ -1.1
SF3B3-209ENST00000567635 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-209ENST00000567635 GRB14Q14449 540 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 TMEM132BQ14DG7 1078 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 PPP4R3BQ5MIZ7 849 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 VPS53Q5VIR6 699 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 NCAPG2Q86XI2 1143 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 ABRAQ8N0Z2 381 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 ANKLE1Q8NAG6 615 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.1
SF3B3-209ENST00000567635 NPLOC4Q8TAT6 608 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 SLF1Q9BQI6 1058 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 INCENPQ9NQS7 918 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 FLRT1Q9NZU1 646 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 ANAPC4Q9UJX5 808 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 FEM1BQ9UK73 627 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 PPP1R9AQ9ULJ8 1098 aa8.21□□□□□ -1.1
SF3B3-209ENST00000567635 MKI67P46013 3256 aaKnown RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 A0A0D9SFI3 127 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 H0YGN5 161 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 ORC4O43929 436 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 RANBP6O60518 1105 aaKnown RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 ZBED4O75132 1171 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 HSPD1P10809 573 aaKnown RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 CCND3P30281 292 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 OLFML2BQ68BL8 750 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 NECAB2Q7Z6G3 386 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 RIOX2Q8IUF8 465 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 GMCL1P1Q8NEA9 526 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 PAWRQ96IZ0 340 aaKnown RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 NUP88Q99567 741 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 OGDHLQ9ULD0 1010 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 CTDP1Q9Y5B0 961 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-209ENST00000567635 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
SF3B3-209ENST00000567635 FRMPD3Q5JV73 1810 aa8.19□□□□□ -1.1
SF3B3-209ENST00000567635 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
SF3B3-209ENST00000567635 MYH6P13533 1939 aa8.19□□□□□ -1.1
SF3B3-209ENST00000567635 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms