RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 ZNF589Q86UQ0 364 aaPredicted RBP19.72■□□□□ 0.75
PKD1-233ENST00000567355 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.72■□□□□ 0.757e-6■■■□□ 16.7
PKD1-233ENST00000567355 ZMYM6O95789 1325 aa19.72■□□□□ 0.75
PKD1-233ENST00000567355 RPTORQ8N122 1335 aa19.72■□□□□ 0.75
PKD1-233ENST00000567355 COL11A1P12107 1806 aaPredicted RBP19.72■□□□□ 0.75
PKD1-233ENST00000567355 TRIM6-TRIM34B2RNG4 842 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 F5H6K3 240 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 SLC3A2P08195 630 aaKnown RBP19.71■□□□□ 0.75
PKD1-233ENST00000567355 SDSP20132 328 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 KLRC3Q07444 240 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 CCL14Q16627 93 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 FAM83BQ5T0W9 1011 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 REPS2Q8NFH8 660 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 DEFB118Q96PH6 123 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 FBXO28Q9NVF7 368 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 CLIP2Q9UDT6 1046 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 PPP1R9AQ9ULJ8 1098 aa19.71■□□□□ 0.75
PKD1-233ENST00000567355 TTLL1O95922 423 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 NDUFB10O96000 172 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 FGAP02671 866 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 HSPD1P10809 573 aaKnown RBP19.7■□□□□ 0.74
PKD1-233ENST00000567355 TFAP4Q01664 338 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 CTDSPL2Q05D32 466 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 TMEM132BQ14DG7 1078 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 GMCL1P1Q8NEA9 526 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 RILPL2Q969X0 211 aa19.7■□□□□ 0.74
PKD1-233ENST00000567355 HMX1Q9NP08 348 aaPredicted RBP19.7■□□□□ 0.74
PKD1-233ENST00000567355 VWA5AO00534 786 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 STRNO43815 780 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 TSPY3P0CV98 308 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 TSPY8P0CW00 308 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 ZKSCAN1P17029 563 aaPredicted RBP19.69■□□□□ 0.74
PKD1-233ENST00000567355 ERCC3P19447 782 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 PDE4AP27815 886 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 NOVP48745 357 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
PKD1-233ENST00000567355 CACNB2Q08289 660 aaPredicted RBP19.69■□□□□ 0.74
PKD1-233ENST00000567355 FAM47AQ5JRC9 791 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 MROH8Q9H579 483 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 FLRT1Q9NZU1 646 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 CCDC171Q6TFL3 1326 aa19.69■□□□□ 0.74
PKD1-233ENST00000567355 ORC4O43929 436 aa19.68■□□□□ 0.74
PKD1-233ENST00000567355 PRKAR2AP13861 404 aaKnown RBP19.68■□□□□ 0.74
PKD1-233ENST00000567355 ABRAQ8N0Z2 381 aa19.68■□□□□ 0.74
PKD1-233ENST00000567355 NPLOC4Q8TAT6 608 aa19.68■□□□□ 0.74
PKD1-233ENST00000567355 NUP88Q99567 741 aaPredicted RBP19.68■□□□□ 0.74
PKD1-233ENST00000567355 ZNF214Q9UL59 606 aaPredicted RBP19.68■□□□□ 0.74
PKD1-233ENST00000567355 IVNS1ABPQ9Y6Y0 642 aa19.68■□□□□ 0.74
PKD1-233ENST00000567355 WDR78Q5VTH9 848 aa19.67■□□□□ 0.74
PKD1-233ENST00000567355 CWC22Q9HCG8 908 aaKnown RBP19.67■□□□□ 0.74
PKD1-233ENST00000567355 IL17RBQ9NRM6 502 aa19.67■□□□□ 0.74
PKD1-233ENST00000567355 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
PKD1-233ENST00000567355 SLC25A27O95847 323 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 TFRCP02786 760 aaKnown RBP19.66■□□□□ 0.74
PKD1-233ENST00000567355 ADORA2AP29274 412 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 MNX1P50219 401 aaPredicted RBP19.66■□□□□ 0.74
PKD1-233ENST00000567355 RIOX2Q8IUF8 465 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 LRRC47Q8N1G4 583 aaKnown RBP19.66■□□□□ 0.74
PKD1-233ENST00000567355 ANKLE1Q8NAG6 615 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 SLF1Q9BQI6 1058 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 NBPF3Q9H094 633 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 OGDHLQ9ULD0 1010 aa19.66■□□□□ 0.74
PKD1-233ENST00000567355 RAD21O60216 631 aa19.65■□□□□ 0.74
PKD1-233ENST00000567355 PLS1Q14651 629 aa19.65■□□□□ 0.74
PKD1-233ENST00000567355 PRPF38AQ8NAV1 312 aaKnown RBP19.65■□□□□ 0.74
PKD1-233ENST00000567355 TSPY2A6NKD2 308 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 ATP2A1O14983 1001 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 COBLO75128 1261 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 GSPT1P15170 499 aaKnown RBP19.64■□□□□ 0.73
PKD1-233ENST00000567355 CCND3P30281 292 aaPredicted RBP19.64■□□□□ 0.73
PKD1-233ENST00000567355 STAT3P40763 770 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 MFAP1P55081 439 aaKnown RBP19.64■□□□□ 0.73
PKD1-233ENST00000567355 PPP4R3BQ5MIZ7 849 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 OLFML2BQ68BL8 750 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 LHX8Q68G74 356 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 NCAPG2Q86XI2 1143 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 GMCL1Q96IK5 515 aa19.64■□□□□ 0.73
PKD1-233ENST00000567355 LAMA4Q16363 1823 aa19.63■□□□□ 0.73
PKD1-233ENST00000567355 HIP1O00291 1037 aa19.63■□□□□ 0.73
PKD1-233ENST00000567355 NMT2O60551 498 aa19.63■□□□□ 0.73
PKD1-233ENST00000567355 TTC22Q5TAA0 569 aa19.63■□□□□ 0.73
PKD1-233ENST00000567355 SLFN13Q68D06 897 aa19.63■□□□□ 0.73
PKD1-233ENST00000567355 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
PKD1-233ENST00000567355 CWC27Q6UX04 472 aaKnown RBP19.63■□□□□ 0.73
PKD1-233ENST00000567355 FEM1BQ9UK73 627 aa19.63■□□□□ 0.73
PKD1-233ENST00000567355 ZNFX1Q9P2E3 1918 aaKnown RBP19.63■□□□□ 0.73
PKD1-233ENST00000567355 FRMPD3Q5JV73 1810 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 DNAH12Q6ZR08 3092 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
PKD1-233ENST00000567355 FCER1AP12319 257 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 BMP3P12645 472 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 COPB2P35606 906 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 MFSD14CQ5VZR4 134 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 DPP9Q86TI2 863 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 DIS3LQ8TF46 1054 aaKnown RBP19.62■□□□□ 0.73
PKD1-233ENST00000567355 STAG1Q8WVM7 1258 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 TEX13BQ9BXU2 312 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 SLC38A10Q9HBR0 1119 aa19.62■□□□□ 0.73
PKD1-233ENST00000567355 DIAPH3Q9NSV4 1193 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms