RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
NIFKP4-201ENST00000567275 UNC5AQ6ZN44 842 aa13.08□□□□□ -0.32
NIFKP4-201ENST00000567275 CBLL1Q75N03 491 aa13.08□□□□□ -0.32
NIFKP4-201ENST00000567275 SHISA3A0PJX4 238 aa13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 ESR1P03372 595 aa13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 LTKP29376 864 aa13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 GAB4Q2WGN9 574 aa13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 SHDQ96IW2 340 aa13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 FBXL21Q9UKT6 434 aa13.06□□□□□ -0.32
NIFKP4-201ENST00000567275 TAL1P17542 331 aaPredicted RBP13.05□□□□□ -0.32
NIFKP4-201ENST00000567275 PMS1P54277 932 aaKnown RBP13.05□□□□□ -0.32
NIFKP4-201ENST00000567275 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
NIFKP4-201ENST00000567275 LRRN4CLQ8ND94 238 aa13.05□□□□□ -0.32
NIFKP4-201ENST00000567275 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
NIFKP4-201ENST00000567275 SLC12A7Q9Y666 1083 aa13.05□□□□□ -0.32
NIFKP4-201ENST00000567275 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 MCTP1Q6DN14 999 aa13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 TMC3Q7Z5M5 1100 aa13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 ANAPC16Q96DE5 110 aa13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 PCDHB12Q9Y5F1 795 aa13.04□□□□□ -0.32
NIFKP4-201ENST00000567275 WIZO95785 1651 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 SSBP05455 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 EGR3Q06889 387 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 AUHQ13825 339 aaKnown RBP13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 TDRD10Q5VZ19 366 aaKnown RBP13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 ALPK1Q96QP1 1244 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 PRDM14Q9GZV8 571 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 CFTRP13569 1480 aa13.03□□□□□ -0.32
NIFKP4-201ENST00000567275 C9IYK1 514 aa13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 BIN1O00499 593 aa13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 BBS9Q3SYG4 887 aa13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 C19orf47Q8N9M1 422 aaKnown RBP13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 SYTL5Q8TDW5 730 aaPredicted RBP13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 SLAMF8Q9P0V8 285 aa13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
NIFKP4-201ENST00000567275 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
NIFKP4-201ENST00000567275 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
NIFKP4-201ENST00000567275 HDAC8Q9BY41 377 aa13.01□□□□□ -0.33
NIFKP4-201ENST00000567275 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
NIFKP4-201ENST00000567275 SIGLEC6O43699 453 aa13□□□□□ -0.33
NIFKP4-201ENST00000567275 TP53P04637 393 aaPredicted RBP13□□□□□ -0.33
NIFKP4-201ENST00000567275 ARID5AQ03989 594 aa13□□□□□ -0.33
NIFKP4-201ENST00000567275 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
NIFKP4-201ENST00000567275 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
NIFKP4-201ENST00000567275 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 A0A1W2PQH9 124 aa12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 PRAMEF1O95521 474 aa12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 PPFIBP1Q86W92 1011 aa12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 C7orf61Q8IZ16 206 aa12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 ZNF655Q8N720 491 aaPredicted RBP12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
NIFKP4-201ENST00000567275 DNAJA1P31689 397 aaKnown RBP12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 TCTN2Q96GX1 697 aa12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 PHAXQ9H814 394 aaKnown RBP12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
NIFKP4-201ENST00000567275 RSF1Q96T23 1441 aaPredicted RBP12.97□□□□□ -0.33
NIFKP4-201ENST00000567275 SSU72P8A0A1W2PR75 194 aa12.97□□□□□ -0.33
NIFKP4-201ENST00000567275 GNPTABQ3T906 1256 aa12.97□□□□□ -0.33
NIFKP4-201ENST00000567275 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
NIFKP4-201ENST00000567275 FAM169BQ8N8A8 192 aa12.97□□□□□ -0.33
NIFKP4-201ENST00000567275 DNAJC25-GNG10A0A024R161 153 aa12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 MEIS1O00470 390 aa12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 JUNBP17275 347 aaPredicted RBP12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 RALGPS1Q5JS13 557 aa12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 TMEM59LQ9UK28 342 aa12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
NIFKP4-201ENST00000567275 ITGB5P18084 799 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 CASP7P55210 303 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 PCBP3P57721 371 aaKnown RBP12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 SLC43A3Q8NBI5 491 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 PRR13Q9NZ81 148 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 MINPP1Q9UNW1 487 aa12.95□□□□□ -0.34
NIFKP4-201ENST00000567275 GDNFP39905 211 aa12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 NOL9Q5SY16 702 aaKnown RBP12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 ADAMTS10Q9H324 1103 aa12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 PCDHB10Q9UN67 800 aa12.94□□□□□ -0.34
NIFKP4-201ENST00000567275 SHOXO15266 292 aa12.93□□□□□ -0.34
NIFKP4-201ENST00000567275 FGRP09769 529 aa12.93□□□□□ -0.34
NIFKP4-201ENST00000567275 HK2P52789 917 aa12.93□□□□□ -0.34
NIFKP4-201ENST00000567275 SLC7A5Q01650 507 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms