RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 RRAGBQ5VZM2 374 aa7.34□□□□□ -1.23
GINS3-206ENST00000567143 STYK1Q6J9G0 422 aa7.34□□□□□ -1.23
GINS3-206ENST00000567143 GSPT2Q8IYD1 628 aaKnown RBP7.34□□□□□ -1.23
GINS3-206ENST00000567143 SLC35F6Q8N357 371 aa7.34□□□□□ -1.23
GINS3-206ENST00000567143 BRIP1Q9BX63 1249 aa7.34□□□□□ -1.23
GINS3-206ENST00000567143 HDAC6Q9UBN7 1215 aa7.34□□□□□ -1.23
GINS3-206ENST00000567143 HOOK1Q9UJC3 728 aaKnown RBP7.34□□□□□ -1.23
GINS3-206ENST00000567143 FBXO2Q9UK22 296 aaPredicted RBP7.34□□□□□ -1.23
GINS3-206ENST00000567143 MYH3P11055 1940 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 TRIM49BA6NDI0 452 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 EFCAB8A8MWE9 144 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 ADAMTS3O15072 1205 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 KIF5CO60282 957 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 NFIXQ14938 502 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 LONRF2Q1L5Z9 754 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PIK3AP1Q6ZUJ8 805 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 ADGRA1Q86SQ6 560 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 ZNF654Q8IZM8 581 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PCMTD1Q96MG8 357 aaPredicted RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 PNKPQ96T60 521 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 BPIFA3Q9BQP9 254 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PCNTO95613 3336 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 TNKSO95271 1327 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 SYNRGQ9UMZ2 1314 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 ZC3H4Q9UPT8 1303 aaKnown RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 TRIM75PA6NK02 468 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PP2D1A8MPX8 630 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 TULP1O00294 542 aaPredicted RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 PPP6R2O75170 966 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 JAKMIP3Q5VZ66 844 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 DZIP3Q86Y13 1208 aaKnown RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 CERS3Q8IU89 383 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 FANCBQ8NB91 859 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 VPS33BQ9H267 617 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 CPVLQ9H3G5 476 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 LCMT1Q9UIC8 334 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 GDAQ9Y2T3 454 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PHLPP2Q6ZVD8 1323 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PATL2C9JE40 543 aaKnown RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 CCP110O43303 1012 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 NTSR2O95665 410 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 PCCAP05165 728 aaPredicted RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.24
GINS3-206ENST00000567143 RIN2Q8WYP3 895 aaPredicted RBP7.33□□□□□ -1.24
GINS3-206ENST00000567143 GOLGA1Q92805 767 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 GPKOWQ92917 476 aaPredicted RBP eCLIP7.33□□□□□ -1.24
GINS3-206ENST00000567143 NYXQ9GZU5 481 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 MRFAP1Q9Y605 127 aa7.33□□□□□ -1.24
GINS3-206ENST00000567143 ZRANB2O95218 330 aaKnown RBP eCLIP7.32□□□□□ -1.24
GINS3-206ENST00000567143 PTPREP23469 700 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 CYP2C19P33261 490 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 PTGDRQ13258 359 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 FOXR1Q6PIV2 292 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 CRACR2BQ8N4Y2 399 aaPredicted RBP7.32□□□□□ -1.24
GINS3-206ENST00000567143 NOA1Q8NC60 698 aaKnown RBP7.32□□□□□ -1.24
GINS3-206ENST00000567143 SHISA4Q96DD7 197 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 TMEM87BQ96K49 555 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 CHP1Q99653 195 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 NACAP1Q9BZK3 213 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 ZPR1O75312 459 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 FMNL1O95466 1100 aaPredicted RBP7.32□□□□□ -1.24
GINS3-206ENST00000567143 CAPN2P17655 700 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 MAP3K9P80192 1104 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 RAD51AP2Q09MP3 1159 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 ZSCAN26Q16670 478 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 DNAJC21Q5F1R6 531 aaKnown RBP7.32□□□□□ -1.24
GINS3-206ENST00000567143 ABCB6Q9NP58 842 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 TMEM51Q9NW97 253 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.32□□□□□ -1.24
GINS3-206ENST00000567143 FAN1Q9Y2M0 1017 aa7.32□□□□□ -1.24
GINS3-206ENST00000567143 ACTN4O43707 911 aaKnown RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 STX10O60499 249 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 IFNAR1P17181 557 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 GTF2E1P29083 439 aaPredicted RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 KRT9P35527 623 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 VSNL1P62760 191 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 CUL4BQ13620 913 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 TTF1Q15361 905 aaPredicted RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 PUM3Q15397 648 aaKnown RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 ENOX2Q16206 610 aaKnown RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 RILPL1Q5EBL4 403 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 IFIT1BQ5T764 474 aaKnown RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 TBC1D9BQ66K14 1250 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 SLC51AQ86UW1 340 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 CALCOCO1Q9P1Z2 691 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 ADAM21Q9UKJ8 722 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 ADGRG1Q9Y653 693 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 RFX7Q2KHR2 1363 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 MACROD2A1Z1Q3 448 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 CYP2D6P10635 497 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 SLC5A1P13866 664 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 NLRP5P59047 1200 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 UBXN1Q04323 297 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 PPARAQ07869 468 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 FILIP1LQ4L180 1135 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 TTC19Q6DKK2 380 aaPredicted RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 RASGRP2Q7LDG7 609 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 MLKLQ8NB16 471 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms