RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 IL17AQ16552 155 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 TMTC1Q8IUR5 882 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 MTRQ99707 1265 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
CDH1-209ENST00000566510 GDAQ9Y2T3 454 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 CCDC151A5D8V7 595 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 SIK1P57059 783 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 E2F4Q16254 413 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 ERFEQ4G0M1 354 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 PLIN2Q99541 437 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 RWDD2AQ9UIY3 292 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 PLCH1Q4KWH8 1693 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 RPN1P04843 607 aaKnown RBP16.07■□□□□ 0.16
CDH1-209ENST00000566510 CYP2D6P10635 497 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 STAT6P42226 847 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 FAM84BQ96KN1 310 aaPredicted RBP16.07■□□□□ 0.16
CDH1-209ENST00000566510 ZNF804BA4D1E1 1349 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
CDH1-209ENST00000566510 HNRNPH2P55795 449 aaKnown RBP16.07■□□□□ 0.16
CDH1-209ENST00000566510 ITPK1Q13572 414 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 RASGRP4Q8TDF6 673 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.16
CDH1-209ENST00000566510 NAPGQ99747 312 aaPredicted RBP16.07■□□□□ 0.16
CDH1-209ENST00000566510 ANKZF1Q9H8Y5 726 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 DUOX1Q9NRD9 1551 aa16.07■□□□□ 0.16
CDH1-209ENST00000566510 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
CDH1-209ENST00000566510 PRCPP42785 496 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 GPS2Q13227 327 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 BRD3Q15059 726 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 PNKPQ96T60 521 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 TFCP2L1Q9NZI6 479 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 LIMA1Q9UHB6 759 aaKnown RBP16.06■□□□□ 0.16
CDH1-209ENST00000566510 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
CDH1-209ENST00000566510 TRIM49BA6NDI0 452 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 MECOMQ03112 1051 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 SPAG1Q07617 926 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 UBE4AQ14139 1066 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
CDH1-209ENST00000566510 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 MINPP1Q9UNW1 487 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 ITIH6Q6UXX5 1313 aa16.06■□□□□ 0.16
CDH1-209ENST00000566510 COL4A1P02462 1669 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 KLRK1P26718 216 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 WWC2Q6AWC2 1192 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 CHP1Q99653 195 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 CRNKL1Q9BZJ0 848 aaKnown RBP16.05■□□□□ 0.16
CDH1-209ENST00000566510 DCP1AQ9NPI6 582 aaPredicted RBP16.05■□□□□ 0.16
CDH1-209ENST00000566510 RMND1Q9NWS8 449 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 ZNF652Q9Y2D9 606 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
CDH1-209ENST00000566510 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
CDH1-209ENST00000566510 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
CDH1-209ENST00000566510 CTAGE15A4D2H0 777 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 ERLIN1O75477 346 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 CTAGE8P0CG41 777 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 CTAGE6Q86UF2 777 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 CTAGE4Q8IX94 777 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 CELF1Q92879 486 aaKnown RBP16.04■□□□□ 0.16
CDH1-209ENST00000566510 PYM1Q9BRP8 204 aaKnown RBP16.04■□□□□ 0.16
CDH1-209ENST00000566510 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 PDE11AQ9HCR9 933 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 BSDC1Q9NW68 430 aaPredicted RBP16.04■□□□□ 0.16
CDH1-209ENST00000566510 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 ZBTB22O15209 634 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 PCP11498 1178 aaKnown RBP16.04■□□□□ 0.16
CDH1-209ENST00000566510 PRDX5P30044 214 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 TRAPPC10P48553 1259 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 DDB1Q16531 1140 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 BLIDQ8IZY5 108 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 MCM9Q9NXL9 1143 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
CDH1-209ENST00000566510 LRRC10BA6NIK2 292 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 H3BQF6 201 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 KIF5BP33176 963 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 TSR1Q2NL82 804 aaKnown RBP16.03■□□□□ 0.16
CDH1-209ENST00000566510 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 TXLNBQ8N3L3 684 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
CDH1-209ENST00000566510 CCDC194A0A1B0GVG4 234 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 ENC1O14682 589 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 PARP1P09874 1014 aaKnown RBP16.03■□□□□ 0.16
CDH1-209ENST00000566510 LMAN1P49257 510 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 DTHD1Q6ZMT9 781 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms