RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ARL6IP4Q66PJ3 421 aaKnown RBP24.38■■□□□ 1.49
SPSB3-208ENST00000566339 HAUS4Q9H6D7 363 aa24.38■■□□□ 1.49
SPSB3-208ENST00000566339 TNKSO95271 1327 aa24.38■■□□□ 1.49
SPSB3-208ENST00000566339 A0A1W2PQC6 194 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 H3BQF6 201 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 H7C1D1 291 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 N4BP3O15049 544 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 MYL1P05976 194 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 AMPD2Q01433 879 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 PAK1Q13153 545 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 SF3B2Q13435 895 aaKnown RBP24.37■■□□□ 1.49
SPSB3-208ENST00000566339 KRT31Q15323 416 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 TTC38Q5R3I4 469 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 ZNF658Q5TYW1 1059 aaPredicted RBP24.37■■□□□ 1.49
SPSB3-208ENST00000566339 LEKR1Q6ZMV7 388 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 CTCFLQ8NI51 663 aaPredicted RBP24.37■■□□□ 1.49
SPSB3-208ENST00000566339 NUP133Q8WUM0 1156 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 TOMM22Q9NS69 142 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 GPTP24298 496 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 ARHGAP25P42331 645 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 AFMP43652 599 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 FXR1P51114 621 aaKnown RBP eCLIP24.37■■□□□ 1.49
SPSB3-208ENST00000566339 EHBP1Q8NDI1 1231 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 EPSTI1Q96J88 318 aa24.37■■□□□ 1.49
SPSB3-208ENST00000566339 ZCCHC17Q9NP64 241 aaKnown RBP24.37■■□□□ 1.49
SPSB3-208ENST00000566339 MAP9Q49MG5 647 aa24.36■■□□□ 1.49
SPSB3-208ENST00000566339 KLHL10Q6JEL2 608 aa24.36■■□□□ 1.49
SPSB3-208ENST00000566339 DEFB132Q7Z7B7 95 aa24.36■■□□□ 1.49
SPSB3-208ENST00000566339 CCDC148Q8NFR7 591 aa24.36■■□□□ 1.49
SPSB3-208ENST00000566339 ZSCAN10Q96SZ4 725 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-208ENST00000566339 IRX2Q9BZI1 471 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-208ENST00000566339 MKRN1Q9UHC7 482 aaKnown RBP24.36■■□□□ 1.49
SPSB3-208ENST00000566339 MYO6Q9UM54 1294 aa24.36■■□□□ 1.49
SPSB3-208ENST00000566339 ZBTB1Q9Y2K1 713 aa24.36■■□□□ 1.49
SPSB3-208ENST00000566339 DUOX1Q9NRD9 1551 aa24.35■■□□□ 1.49
SPSB3-208ENST00000566339 PSMD14O00487 310 aa24.35■■□□□ 1.49
SPSB3-208ENST00000566339 HSP90B2PQ58FF3 399 aa24.35■■□□□ 1.49
SPSB3-208ENST00000566339 NOC3LQ8WTT2 800 aaKnown RBP24.35■■□□□ 1.49
SPSB3-208ENST00000566339 BRIP1Q9BX63 1249 aa24.35■■□□□ 1.49
SPSB3-208ENST00000566339 PUF60Q9UHX1 559 aaKnown RBP24.35■■□□□ 1.49
SPSB3-208ENST00000566339 TARSL2A2RTX5 802 aaKnown RBP24.34■■□□□ 1.49
SPSB3-208ENST00000566339 PRKAB2O43741 272 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 ERVK-24P63145 666 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 TCP11X2Q5H9J9 407 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 PDXDC2PQ6P474 469 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 PNKPQ96T60 521 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 ABCB6Q9NP58 842 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 CTNND2Q9UQB3 1225 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 XDHP47989 1333 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 CAPN2P17655 700 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 LONP1P36776 959 aaKnown RBP24.34■■□□□ 1.49
SPSB3-208ENST00000566339 STX17P56962 302 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 IQCA1Q86XH1 822 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 ZKSCAN3Q9BRR0 538 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 PDE11AQ9HCR9 933 aa24.34■■□□□ 1.49
SPSB3-208ENST00000566339 FEZ2Q9UHY8 353 aaPredicted RBP24.34■■□□□ 1.49
SPSB3-208ENST00000566339 EEF1GP26641 437 aaKnown RBP24.33■■□□□ 1.49
SPSB3-208ENST00000566339 LMAN1P49257 510 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 AARSP49588 968 aaKnown RBP eCLIP24.33■■□□□ 1.49
SPSB3-208ENST00000566339 CKAP4Q07065 602 aaKnown RBP24.33■■□□□ 1.49
SPSB3-208ENST00000566339 RRAGBQ5VZM2 374 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 TMTC3Q6ZXV5 915 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 CPLX3Q8WVH0 158 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 RUBCNQ92622 972 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 VPS54Q9P1Q0 977 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 A0A1B0GUL6 1792 aa24.33■■□□□ 1.49
SPSB3-208ENST00000566339 KCNJ18B7U540 433 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 ATP2B1P20020 1258 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 KCNJ12Q14500 433 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 KCNB1Q14721 858 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 CASP8Q14790 479 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 IFIT1BQ5T764 474 aaKnown RBP24.32■■□□□ 1.48
SPSB3-208ENST00000566339 TRAPPC11Q7Z392 1133 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 IQCDQ96DY2 449 aa24.32■■□□□ 1.48
SPSB3-208ENST00000566339 NUP88Q99567 741 aaPredicted RBP24.32■■□□□ 1.48
SPSB3-208ENST00000566339 EPN1Q9Y6I3 576 aaPredicted RBP24.32■■□□□ 1.48
SPSB3-208ENST00000566339 KRT83P78385 493 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 ENAHQ8N8S7 591 aaPredicted RBP24.31■■□□□ 1.48
SPSB3-208ENST00000566339 OR8K1Q8NGG5 319 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 SHISA4Q96DD7 197 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 CDC5LQ99459 802 aaKnown RBP24.31■■□□□ 1.48
SPSB3-208ENST00000566339 LRP2BPQ9P2M1 347 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 MAGEB6P1A0A0J9YX57 407 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 KRT9P35527 623 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 TROAPQ12815 778 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 NPY5RQ15761 445 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 PARP10Q53GL7 1025 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 RETREG2Q8NC44 543 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 DNAJC7Q99615 494 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 THAP9Q9H5L6 903 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 MYH2Q9UKX2 1941 aa24.31■■□□□ 1.48
SPSB3-208ENST00000566339 ZNF804BA4D1E1 1349 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 NDUFA10O95299 355 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 CYP7A1P22680 504 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 CALML3P27482 149 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 IGHMBP2P38935 993 aaKnown RBP24.3■■□□□ 1.48
SPSB3-208ENST00000566339 PPP1R2P41236 205 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 PTGDRQ13258 359 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 MCM6Q14566 821 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 TSR1Q2NL82 804 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms