RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 GRK4P32298 578 aa16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 IMMTQ16891 758 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 ZNF333Q96JL9 665 aa16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 IL17RBQ9NRM6 502 aa16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
HERPUD1-210ENST00000565966 RGS19P49795 217 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 NT5C2P49902 561 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 SOX10P56693 466 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 LRRC47Q8N1G4 583 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 GMCL1P1Q8NEA9 526 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 PXYLP1Q8TE99 480 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 LSG1Q9H089 658 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 PORCNQ9H237 461 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 TCP11L1Q9NUJ3 509 aa16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-210ENST00000565966 ADCY3O60266 1144 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 NMT2O60551 498 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 NOVP48745 357 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 SLFN13Q68D06 897 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 GPR142Q7Z601 462 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 NKX2-3Q8TAU0 364 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 ATG4CQ96DT6 458 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 NUDT12Q9BQG2 462 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 PPP1R9AQ9ULJ8 1098 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 ADAMTS5Q9UNA0 930 aa16.32■□□□□ 0.2
HERPUD1-210ENST00000565966 NEDD4P46934 1319 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 CYP21A2P08686 494 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 UBXN2AP68543 259 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 CASC1Q6TDU7 716 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 ESR2Q92731 530 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 SPATC1LQ9H0A9 340 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 FBXO28Q9NVF7 368 aa16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-210ENST00000565966 BMP3P12645 472 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 SHCBP1Q8NEM2 672 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 TTC14Q96N46 770 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 SLF1Q9BQI6 1058 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 MOV10L1Q9BXT6 1211 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
HERPUD1-210ENST00000565966 VWA5AO00534 786 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 ELNP15502 786 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 CYP2B6P20813 491 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 SLC1A4P43007 532 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 PLS1Q14651 629 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 TMEM132BQ14DG7 1078 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 MORN1Q5T089 497 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 TAF6LQ9Y6J9 622 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 IVNS1ABPQ9Y6Y0 642 aa16.29■□□□□ 0.2
HERPUD1-210ENST00000565966 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 B4E1Z4 1266 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 STRNO43815 780 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 KDM4AO75164 1064 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 SLC25A27O95847 323 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 MYCP01106 439 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 ERCC3P19447 782 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 PTPREP23469 700 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 MCCP23508 829 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 RGS2P41220 211 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 CCDC178Q5BJE1 867 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 IQCA1Q86XH1 822 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 USP6NLQ92738 828 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 TMEM47Q9BQJ4 181 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 KRT23Q9C075 422 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 MROH8Q9H579 483 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 CNNM2Q9H8M5 875 aa16.28■□□□□ 0.2
HERPUD1-210ENST00000565966 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 TMEM232C9JQI7 657 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 STAT3P40763 770 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 MAP2K5Q13163 448 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 MTFR1Q15390 333 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 RCSD1Q6JBY9 416 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 TRMT44Q8IYL2 757 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 CHURC1Q8WUH1 139 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 KIFC2Q96AC6 838 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
HERPUD1-210ENST00000565966 SMCHD1A6NHR9 2005 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 PLA2G6O60733 806 aa16.26■□□□□ 0.19
HERPUD1-210ENST00000565966 ZBED4O75132 1171 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms