RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 MYL10Q9BUA6 226 aa14.93□□□□□ -0.02
CFDP1-205ENST00000565646 SH2D4AQ9H788 454 aa14.93□□□□□ -0.02
CFDP1-205ENST00000565646 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
CFDP1-205ENST00000565646 FKTNO75072 461 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 SNHG28P0DPA3 235 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 PDHBP11177 359 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 FGD1P98174 961 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 SNAPC2Q13487 334 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
CFDP1-205ENST00000565646 USP17L2Q6R6M4 530 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 GOPCQ9HD26 462 aa14.92□□□□□ -0.02
CFDP1-205ENST00000565646 KLF18A0A0U1RQI7 1052 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 CCDC69A6NI79 296 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 GTF2A2P52657 109 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 USP14P54578 494 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 SLFN13Q68D06 897 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 GPAT2Q6NUI2 795 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 NFXL1Q6ZNB6 911 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 LPAR1Q92633 364 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 CHMP4CQ96CF2 233 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 NUP88Q99567 741 aaPredicted RBP14.91□□□□□ -0.02
CFDP1-205ENST00000565646 R3HDMLQ9H3Y0 253 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 TPCN1Q9ULQ1 816 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 MTMR7Q9Y216 660 aa14.91□□□□□ -0.02
CFDP1-205ENST00000565646 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
CFDP1-205ENST00000565646 DDAH1O94760 285 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 LARGE1O95461 756 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 VCAM1P19320 739 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 ZNF543Q08ER8 600 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 TREML2Q5T2D2 321 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 CATIPQ7Z7H3 387 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 RAB11FIP4Q86YS3 637 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 PROCA1Q8NCQ7 364 aaPredicted RBP14.9□□□□□ -0.02
CFDP1-205ENST00000565646 GMCL1Q96IK5 515 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 PTPN18Q99952 460 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 SLC12A7Q9Y666 1083 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
CFDP1-205ENST00000565646 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
CFDP1-205ENST00000565646 NID2Q14112 1375 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 CCL15-CCL14A0A0B4J2E2 113 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 ZBTB43O43298 467 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 CETPP11597 493 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 RXRAP19793 462 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
CFDP1-205ENST00000565646 GRM4Q14833 912 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 ANKRD1Q15327 319 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 CCL15Q16663 113 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 FAM83BQ5T0W9 1011 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 GADL1Q6ZQY3 521 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
CFDP1-205ENST00000565646 MICU3Q86XE3 530 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 STAG2Q8N3U4 1231 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 IL27Q8NEV9 243 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 DCAF4Q8WV16 495 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 ZNF274Q96GC6 653 aaPredicted RBP14.89□□□□□ -0.03
CFDP1-205ENST00000565646 MAP3K14Q99558 947 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 FAM217BQ9NTX9 383 aaPredicted RBP14.89□□□□□ -0.03
CFDP1-205ENST00000565646 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 MAD2L2Q9UI95 211 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 MYH6P13533 1939 aa14.89□□□□□ -0.03
CFDP1-205ENST00000565646 PALM3A6NDB9 673 aaPredicted RBP14.88□□□□□ -0.03
CFDP1-205ENST00000565646 MANSC4A6NHS7 340 aaPredicted RBP14.88□□□□□ -0.03
CFDP1-205ENST00000565646 GOLGA8BA8MQT2 603 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 BTBD19C9JJ37 291 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
CFDP1-205ENST00000565646 RAD21O60216 631 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 ST18O60284 1047 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 ALDH1A1P00352 501 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 BMP3P12645 472 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 RCAN1P53805 252 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 ME3Q16798 604 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 SLC35G1Q2M3R5 365 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 KCTD1Q719H9 257 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 FASTKD5Q7L8L6 764 aaKnown RBP14.88□□□□□ -0.03
CFDP1-205ENST00000565646 NUP133Q8WUM0 1156 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 CFHR5Q9BXR6 569 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 RPAP3Q9H6T3 665 aaPredicted RBP14.88□□□□□ -0.03
CFDP1-205ENST00000565646 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
CFDP1-205ENST00000565646 FRMPD2Q68DX3 1309 aaPredicted RBP14.88□□□□□ -0.03
CFDP1-205ENST00000565646 GOLGA8HP0CJ92 632 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 CDC27P30260 824 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 SLC1A4P43007 532 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 INHBEP58166 350 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 TTBK2Q6IQ55 1244 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 CCDC144CPQ8IYA2 1237 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 FAM43AQ8N2R8 423 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 FANCBQ8NB91 859 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
CFDP1-205ENST00000565646 FBXO28Q9NVF7 368 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
CFDP1-205ENST00000565646 GOLGA8AA7E2F4 631 aa14.86□□□□□ -0.03
CFDP1-205ENST00000565646 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
CFDP1-205ENST00000565646 PARP1P09874 1014 aaKnown RBP14.86□□□□□ -0.03
CFDP1-205ENST00000565646 CALM1P0DP23 149 aa14.86□□□□□ -0.03
CFDP1-205ENST00000565646 CALM2P0DP24 149 aa14.86□□□□□ -0.03
CFDP1-205ENST00000565646 CALM3P0DP25 149 aa14.86□□□□□ -0.03
CFDP1-205ENST00000565646 HOXA7P31268 230 aaPredicted RBP14.86□□□□□ -0.03
CFDP1-205ENST00000565646 ST3GAL1Q11201 340 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms