RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 BAG4O95429 457 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 TPM3P06753 285 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 NBPF7P0C2Y1 421 aaPredicted RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 GSPT1P15170 499 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 SELPP16109 830 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 RRM1P23921 792 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 MSNP26038 577 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 MCM2P49736 904 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 RBM5P52756 815 aaKnown RBP eCLIP6□□□□□ -1.45
CAPN3-214ENST00000565274 NUCB2P80303 420 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 TYRO3Q06418 890 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 KIAA2012Q0VF49 1180 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 PTK7Q13308 1070 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 RASA3Q14644 834 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 MBTPS1Q14703 1052 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 ZNF394Q53GI3 561 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 SULT6B1Q6IMI4 303 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 IQCEQ6IPM2 695 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 CCDC73Q6ZRK6 1079 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 MTERF4Q7Z6M4 381 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 FILIP1Q7Z7B0 1213 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 KIAA1958Q8N8K9 716 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 FRS2Q8WU20 508 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 DHX38Q92620 1227 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 GOLGA1Q92805 767 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 PBXIP1Q96AQ6 731 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 NGLY1Q96IV0 654 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 PDLIM2Q96JY6 352 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 NAP1L4Q99733 375 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 DUSP9Q99956 384 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 THUMPD2Q9BTF0 503 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 TSPYL1Q9H0U9 437 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 PCDH12Q9NPG4 1184 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 CHCHD3Q9NX63 227 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 UTP6Q9NYH9 597 aaKnown RBP6□□□□□ -1.45
CAPN3-214ENST00000565274 STAP2Q9UGK3 403 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 TCEAL9Q9UHQ7 104 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 ACAD8Q9UKU7 415 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 DIP2AQ14689 1571 aa6□□□□□ -1.45
CAPN3-214ENST00000565274 ACEP12821 1306 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 AOX1Q06278 1338 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 IGSF1Q8N6C5 1336 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 SALL3Q9BXA9 1300 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 USP54Q70EL1 1684 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 FLT4P35916 1363 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 TMEM238LA0A1B0GVL6 79 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 PPP1R12BO60237 982 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 REC8O95072 547 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 FBLN1P23142 703 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 MCM5P33992 734 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 RAC1P63000 192 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 CLDN10P78369 228 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 MLECQ14165 292 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 C1orf53Q5VUE5 145 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 UBE2Q1Q7Z7E8 422 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 MYO1HQ8N1T3 1032 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 MIGA1Q8NAN2 632 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 TSEN2Q8NCE0 465 aaKnown RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 ERCC4Q92889 916 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 TP53INP1Q96A56 240 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 LZTS2Q9BRK4 669 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 ZHX3Q9H4I2 956 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 DDX56Q9NY93 547 aaKnown RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 USP21Q9UK80 565 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 SLC6A14Q9UN76 642 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 DDX49Q9Y6V7 483 aaKnown RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 UBR1Q8IWV7 1749 aa5.99□□□□□ -1.45
CAPN3-214ENST00000565274 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-214ENST00000565274 PXDNLA1KZ92 1463 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 DLG5Q8TDM6 1919 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 USP17L3A6NCW0 530 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 USP17L4A6NCW7 530 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 KIF5CO60282 957 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 LDHAP00338 332 aaKnown RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 GNAI3P08754 354 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 HOXB7P09629 217 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 FOSL1P15407 271 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 ELNP15502 786 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 ATP1A2P50993 1020 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 ATP8B2P98198 1209 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 CCDC15Q0P6D6 951 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 SIM2Q14190 667 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 ADGRE1Q14246 886 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 RRS1Q15050 365 aaKnown RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 SOGA3Q5TF21 947 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 USP17L2Q6R6M4 530 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 OTUD6AQ7L8S5 288 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 USP17L1Q7RTZ2 530 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 TXNRD3Q86VQ6 643 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 JAZF1Q86VZ6 243 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 DMRTC2Q8IXT2 367 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 KLHL23Q8NBE8 558 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 TAF4BQ92750 862 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 ZNF594Q96JF6 807 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 TEX13AQ9BXU3 409 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 SRCIN1Q9C0H9 1055 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 MED4Q9NPJ6 270 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms