RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 GJA8P48165 433 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 CDCP2Q5VXM1 449 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 FBXW10Q5XX13 1052 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 SMAP1Q8IYB5 467 aaPredicted RBP6.96□□□□□ -1.3
CHD9-210ENST00000564582 FLCNQ8NFG4 579 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 DNAJB8Q8NHS0 232 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 RASGRP4Q8TDF6 673 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 ASB11Q8WXH4 323 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD9-210ENST00000564582 TNKS2Q9H2K2 1166 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 KCNH3Q9ULD8 1083 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 THOC2Q8NI27 1593 aaKnown RBP6.95□□□□□ -1.3
CHD9-210ENST00000564582 NAIPQ13075 1403 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 PTPN23Q9H3S7 1636 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 FSD2A1L4K1 749 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 MEIS3P2A8K0S8 358 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 RGS13O14921 159 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 DNAJA2O60884 412 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 MCM5P33992 734 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 VPS37DQ86XT2 251 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 SPACA3Q8IXA5 215 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 BAHD1Q8TBE0 780 aaPredicted RBP6.95□□□□□ -1.3
CHD9-210ENST00000564582 PIWIL2Q8TC59 973 aaKnown RBP6.95□□□□□ -1.3
CHD9-210ENST00000564582 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 CRBNQ96SW2 442 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 KIF2CQ99661 725 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 ASPNQ9BXN1 380 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 ACBD3Q9H3P7 528 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 CAPN6Q9Y6Q1 641 aa6.95□□□□□ -1.3
CHD9-210ENST00000564582 RNF4P78317 190 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 AOC3Q16853 763 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 NKPD1Q17RQ9 610 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 UTP14CQ5TAP6 766 aaKnown RBP6.94□□□□□ -1.3
CHD9-210ENST00000564582 TP53INP2Q8IXH6 220 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 PPP1R13LQ8WUF5 828 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 BCL7CQ8WUZ0 217 aaPredicted RBP6.94□□□□□ -1.3
CHD9-210ENST00000564582 ATG4CQ96DT6 458 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 PLAGL2Q9UPG8 496 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 U3KQE9 123 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 HECW1Q76N89 1606 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 ANKRD30AQ9BXX3 1397 aa6.94□□□□□ -1.3
CHD9-210ENST00000564582 FGD5Q6ZNL6 1462 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 PRR33A8MZF0 331 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
CHD9-210ENST00000564582 SOX9P48436 509 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 GP2P55259 537 aaKnown RBP6.93□□□□□ -1.3
CHD9-210ENST00000564582 CDKAL1Q5VV42 579 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 SEC16BQ96JE7 1060 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 KREMEN1Q96MU8 473 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 TM9SF2Q99805 663 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 KIF7Q2M1P5 1343 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 ROCK1Q13464 1354 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 MYOM3Q5VTT5 1437 aa6.93□□□□□ -1.3
CHD9-210ENST00000564582 RPRD2Q5VT52 1461 aaKnown RBP6.92□□□□□ -1.3
CHD9-210ENST00000564582 KDM5BQ9UGL1 1544 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 TNFRSF10CO14798 259 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 FRAT2O75474 233 aaPredicted RBP6.92□□□□□ -1.3
CHD9-210ENST00000564582 ANGEL2Q5VTE6 544 aaKnown RBP6.92□□□□□ -1.3
CHD9-210ENST00000564582 THAP5Q7Z6K1 395 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 CPLX3Q8WVH0 158 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 HIRIP3Q9BW71 556 aaPredicted RBP6.92□□□□□ -1.3
CHD9-210ENST00000564582 TRIT1Q9H3H1 467 aaKnown RBP6.92□□□□□ -1.3
CHD9-210ENST00000564582 STRIP2Q9ULQ0 834 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 PPT2Q9UMR5 302 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 MTUS2Q5JR59 1369 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 CARMIL1Q5VZK9 1371 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 ATAD2BQ9ULI0 1458 aa6.92□□□□□ -1.3
CHD9-210ENST00000564582 CLEC3AO75596 197 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 KIF20AO95235 890 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 EIF6P56537 245 aaKnown RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 TNK2Q07912 1038 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 CCDC173Q0VFZ6 552 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 INTS3Q68E01 1043 aaKnown RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 TAB3Q8N5C8 712 aaPredicted RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 DHRS1Q96LJ7 313 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 HSPA12BQ96MM6 686 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 ANTXR1Q9H6X2 564 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 CHMP5Q9NZZ3 219 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
CHD9-210ENST00000564582 DHX29Q7Z478 1369 aaKnown RBP6.91□□□□□ -1.3
CHD9-210ENST00000564582 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 H3BS24 57 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 UBOX5O94941 541 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 MSNP26038 577 aaKnown RBP6.9□□□□□ -1.3
CHD9-210ENST00000564582 RANGAP1P46060 587 aaPredicted RBP6.9□□□□□ -1.3
CHD9-210ENST00000564582 BNIP3Q12983 259 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 IKZF1Q13422 519 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 GBP4Q96PP9 640 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms