RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 BMP3P12645 472 aa21.87■■□□□ 1.09
SPNS1-206ENST00000564476 CCT2P78371 535 aaKnown RBP21.87■■□□□ 1.09
SPNS1-206ENST00000564476 ZNF543Q08ER8 600 aa21.87■■□□□ 1.09
SPNS1-206ENST00000564476 STK3Q13188 491 aa21.87■■□□□ 1.09
SPNS1-206ENST00000564476 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
SPNS1-206ENST00000564476 OTUD5Q96G74 571 aa21.87■■□□□ 1.09
SPNS1-206ENST00000564476 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
SPNS1-206ENST00000564476 FAM217BQ9NTX9 383 aaPredicted RBP21.87■■□□□ 1.09
SPNS1-206ENST00000564476 RASSF10A6NK89 507 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 IRF6O14896 467 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 WDR46O15213 610 aaKnown RBP21.86■■□□□ 1.09
SPNS1-206ENST00000564476 PLA2G6O60733 806 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 MTMR2Q13614 643 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 RGMBQ6NW40 437 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 EMILIN3Q9NT22 766 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 MAD2L2Q9UI95 211 aa21.86■■□□□ 1.09
SPNS1-206ENST00000564476 THSD7BQ9C0I4 1608 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 PTPRFP10586 1907 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 A0A0G2JLL6 359 aaPredicted RBP21.85■■□□□ 1.09
SPNS1-206ENST00000564476 IFNAR1P17181 557 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 CDC27P30260 824 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 ADD1P35611 737 aaKnown RBP21.85■■□□□ 1.09
SPNS1-206ENST00000564476 VEGFBP49765 207 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 SNAPC2Q13487 334 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 FASTKD5Q7L8L6 764 aaKnown RBP21.85■■□□□ 1.09
SPNS1-206ENST00000564476 PRRT2Q7Z6L0 340 aaPredicted RBP21.85■■□□□ 1.09
SPNS1-206ENST00000564476 CCDC83Q8IWF9 413 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 NECAB1Q8N987 351 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 PROCA1Q8NCQ7 364 aaPredicted RBP21.85■■□□□ 1.09
SPNS1-206ENST00000564476 CHURC1Q8WUH1 139 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 CCDC102AQ96A19 550 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 WNK4Q96J92 1243 aa21.85■■□□□ 1.09
SPNS1-206ENST00000564476 ABT1Q9ULW3 272 aaKnown RBP21.85■■□□□ 1.09
SPNS1-206ENST00000564476 KLRF2D3W0D1 207 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 RAD21O60216 631 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 RXRAP19793 462 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 GTF2A2P52657 109 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 SPRYD7Q5W111 196 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 BTNL9Q6UXG8 535 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 TMTC3Q6ZXV5 915 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 FAM160B2Q86V87 743 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 CCDC144CPQ8IYA2 1237 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 RBM27Q9P2N5 1060 aaKnown RBP21.84■■□□□ 1.09
SPNS1-206ENST00000564476 FEM1BQ9UK73 627 aa21.84■■□□□ 1.09
SPNS1-206ENST00000564476 HSP90AA1P07900 732 aaKnown RBP21.83■■□□□ 1.09
SPNS1-206ENST00000564476 ZNF157P51786 506 aaPredicted RBP21.83■■□□□ 1.09
SPNS1-206ENST00000564476 HMGCS2P54868 508 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 ST3GAL1Q11201 340 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 ZYXQ15942 572 aaKnown RBP21.83■■□□□ 1.09
SPNS1-206ENST00000564476 NTRK3Q16288 839 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 CCDC96Q2M329 555 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 DEFB115Q30KQ5 88 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 RAB11FIP4Q86YS3 637 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 CNKSR2Q8WXI2 1034 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 IPO9Q96P70 1041 aaKnown RBP21.83■■□□□ 1.09
SPNS1-206ENST00000564476 NCOA5Q9HCD5 579 aaKnown RBP21.83■■□□□ 1.09
SPNS1-206ENST00000564476 MTMR7Q9Y216 660 aa21.83■■□□□ 1.09
SPNS1-206ENST00000564476 CETPP11597 493 aa21.82■■□□□ 1.08
SPNS1-206ENST00000564476 HMGN5P82970 282 aaKnown RBP21.82■■□□□ 1.08
SPNS1-206ENST00000564476 KIAA1755Q5JYT7 1200 aa21.82■■□□□ 1.08
SPNS1-206ENST00000564476 SPICE1Q8N0Z3 855 aa21.82■■□□□ 1.08
SPNS1-206ENST00000564476 SPZ1Q9BXG8 430 aa21.82■■□□□ 1.08
SPNS1-206ENST00000564476 FDX1P10109 184 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 VCAM1P19320 739 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 INHBEP58166 350 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 PABPC4Q13310 644 aaKnown RBP eCLIP21.81■■□□□ 1.084e-14■■□□□ 13.3
SPNS1-206ENST00000564476 COL13A1Q5TAT6 717 aaPredicted RBP21.81■■□□□ 1.08
SPNS1-206ENST00000564476 TRIM22Q8IYM9 498 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 STAG2Q8N3U4 1231 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 SMARCC2Q8TAQ2 1214 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 RNF26Q9BY78 433 aaPredicted RBP21.81■■□□□ 1.08
SPNS1-206ENST00000564476 RIOX1Q9H6W3 641 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 CWC22Q9HCG8 908 aaKnown RBP21.81■■□□□ 1.08
SPNS1-206ENST00000564476 GPCPD1Q9NPB8 672 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.81■■□□□ 1.08
SPNS1-206ENST00000564476 KIF3AQ9Y496 699 aa21.81■■□□□ 1.08
SPNS1-206ENST00000564476 MYH6P13533 1939 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L15C9J2P7 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L13C9JLJ4 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 TMEM232C9JQI7 657 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L11C9JVI0 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L18D6R9N7 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L22D6RA61 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L17D6RBQ6 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L19D6RCP7 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L20D6RJB6 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 GOLGA8HP0CJ92 632 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 HOXA7P31268 230 aaPredicted RBP21.8■■□□□ 1.08
SPNS1-206ENST00000564476 GJA5P36382 358 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 STAT2P52630 851 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 AKAP17AQ02040 695 aaKnown RBP21.8■■□□□ 1.08
SPNS1-206ENST00000564476 SSRP1Q08945 709 aaKnown RBP21.8■■□□□ 1.08
SPNS1-206ENST00000564476 USP17L24Q0WX57 530 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 FAM83BQ5T0W9 1011 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 KCTD1Q719H9 257 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 SRBD1Q8N5C6 995 aaKnown RBP21.8■■□□□ 1.08
SPNS1-206ENST00000564476 NSUN7Q8NE18 718 aaKnown RBP21.8■■□□□ 1.08
SPNS1-206ENST00000564476 SMC3Q9UQE7 1217 aa21.8■■□□□ 1.08
SPNS1-206ENST00000564476 FRMPD2Q68DX3 1309 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms