RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CCSAPQ6IQ19 270 aaPredicted RBP13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 CDC42EP5Q6NZY7 148 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 WNT8AQ9H1J5 351 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 DOPEY1Q5JWR5 2465 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 KALRNO60229 2985 aa13.73□□□□□ -0.21
HDGFL3-204ENST00000563790 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
HDGFL3-204ENST00000563790 DPP9Q86TI2 863 aa13.72□□□□□ -0.21
HDGFL3-204ENST00000563790 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
HDGFL3-204ENST00000563790 MCM3APO60318 1980 aa13.72□□□□□ -0.21
HDGFL3-204ENST00000563790 LAMA5O15230 3695 aa13.72□□□□□ -0.21
HDGFL3-204ENST00000563790 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
HDGFL3-204ENST00000563790 RFX7Q2KHR2 1363 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 LCHNA4D1U4 455 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 CNMDO75829 334 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 SLURP2P0DP57 97 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 LTBRP36941 435 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 ERVK-21P61565 698 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 NFE2L2Q16236 605 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 KLHDC9Q8NEP7 349 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 MRPL38Q96DV4 380 aaKnown RBP13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
HDGFL3-204ENST00000563790 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 LOC730098B7Z3J9 87 aa13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 GYG1P46976 350 aa13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 KCNA10Q16322 511 aa13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 TIGD5Q53EQ6 642 aa13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 SH3BP5LQ7L8J4 393 aa13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 FAM84BQ96KN1 310 aaPredicted RBP13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 NOC4LQ9BVI4 516 aaKnown RBP13.7□□□□□ -0.22
HDGFL3-204ENST00000563790 ADORA2AP29274 412 aa13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 CRACR2BQ8N4Y2 399 aaPredicted RBP13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 RUBCNQ92622 972 aa13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 OSBPL5Q9H0X9 879 aaPredicted RBP13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 MTUS1Q9ULD2 1270 aa13.69□□□□□ -0.22
HDGFL3-204ENST00000563790 MICAL3Q7RTP6 2002 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 BACE1P56817 501 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 MTMR2Q13614 643 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 HAUS7Q99871 368 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 HINFPQ9BQA5 517 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 SPTAN1Q13813 2472 aaKnown RBP13.68□□□□□ -0.22
HDGFL3-204ENST00000563790 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 ENTPD3O75355 529 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 ACTN1P12814 892 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 WDR18Q9BV38 432 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
HDGFL3-204ENST00000563790 DCDC2BA2VCK2 349 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 STRNO43815 780 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 COBLO75128 1261 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 PROS1P07225 676 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 CLUL1Q15846 466 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 TCEAL5Q5H9L2 206 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 HDGFL1Q5TGJ6 251 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 LENG1Q96BZ8 264 aaPredicted RBP13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 SCLYQ96I15 445 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 MYO9AB2RTY4 2548 aa13.66□□□□□ -0.22
HDGFL3-204ENST00000563790 ABCA12Q86UK0 2595 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 DDTLA6NHG4 134 aaPredicted RBP13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 NCK2O43639 380 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 TBC1D12O60347 775 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 ABCB7O75027 752 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 AKR1A1P14550 325 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 CST5P28325 142 aaPredicted RBP13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 RGS3P49796 1198 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 PTPROQ16827 1216 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 RPAINQ86UA6 219 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 DCLK2Q8N568 766 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 CYP2W1Q8TAV3 490 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 RTKNQ9BST9 563 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
HDGFL3-204ENST00000563790 C19orf81C9J6K1 198 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 CSF1RP07333 972 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 ICAM3P32942 547 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 MKRN4PQ13434 485 aaPredicted RBP13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 CRIPAKQ8N1N5 446 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 VTI1AQ96AJ9 217 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms