RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 PSPNO60542 156 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 EIF4A3P38919 411 aaKnown RBP4.86□□□□□ -1.63
LINC01416-201ENST00000563553 PWP1Q13610 501 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 CCDC27Q2M243 656 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 TMC3Q7Z5M5 1100 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 USHBP1Q8N6Y0 703 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 MCOLN1Q9GZU1 580 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 MRS2Q9HD23 443 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 KIF21BO75037 1637 aa4.86□□□□□ -1.63
LINC01416-201ENST00000563553 TNNI2P48788 182 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 CDCP2Q5VXM1 449 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 ATG14Q6ZNE5 492 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 PHACTR4Q8IZ21 702 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 TOX2Q96NM4 488 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 GZF1Q9H116 711 aaPredicted RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 ANTXR1Q9H6X2 564 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 EHMT1Q9H9B1 1298 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 UBP1Q9NZI7 540 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 GMIPQ9P107 970 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 YBX2Q9Y2T7 364 aaKnown RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 BAZ1BQ9UIG0 1483 aaKnown RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 FITM1A5D6W6 292 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 NPIPB6E9PJ23 425 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 CLCQ05315 142 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 NMIQ13287 307 aaPredicted RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 BBS9Q3SYG4 887 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 NBPF12Q5TAG4 269 aaPredicted RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 SYTL5Q8TDW5 730 aaPredicted RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 ZNF296Q8WUU4 475 aaPredicted RBP4.85□□□□□ -1.63
LINC01416-201ENST00000563553 GCM1Q9NP62 436 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 MINPP1Q9UNW1 487 aa4.85□□□□□ -1.63
LINC01416-201ENST00000563553 HECW2Q9P2P5 1572 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 ERCC3P19447 782 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 KCNA10Q16322 511 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 NBPF9Q3BBW0 867 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 ANKLE2Q86XL3 938 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 LILRA2Q8N149 483 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 INTS4Q96HW7 963 aaKnown RBP4.84□□□□□ -1.63
LINC01416-201ENST00000563553 CNNM2Q9H8M5 875 aa4.84□□□□□ -1.63
LINC01416-201ENST00000563553 ZSCAN22P10073 491 aaPredicted RBP4.84□□□□□ -1.64
LINC01416-201ENST00000563553 CWF19L2Q2TBE0 894 aaKnown RBP4.84□□□□□ -1.64
LINC01416-201ENST00000563553 ZPBP2Q6X784 338 aa4.84□□□□□ -1.64
LINC01416-201ENST00000563553 AMIGO3Q86WK7 504 aa4.84□□□□□ -1.64
LINC01416-201ENST00000563553 IRF2BP1Q8IU81 584 aa4.84□□□□□ -1.64
LINC01416-201ENST00000563553 ATG4CQ96DT6 458 aa4.84□□□□□ -1.64
LINC01416-201ENST00000563553 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.64
LINC01416-201ENST00000563553 SMG5Q9UPR3 1016 aaKnown RBP4.84□□□□□ -1.64
LINC01416-201ENST00000563553 ROBO2Q9HCK4 1378 aa4.84□□□□□ -1.64
LINC01416-201ENST00000563553 NFIBO00712 420 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 LINC00310P59036 64 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 NLRX1Q86UT6 975 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 TMEM192Q8IY95 271 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 TCTN2Q96GX1 697 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 USP2O75604 605 aaPredicted RBP4.83□□□□□ -1.64
LINC01416-201ENST00000563553 SIAH1Q8IUQ4 282 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 OXR1Q8N573 874 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 DAGLBQ8NCG7 672 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 ENOX1Q8TC92 643 aaKnown RBP4.83□□□□□ -1.64
LINC01416-201ENST00000563553 ZNF512BQ96KM6 892 aaPredicted RBP4.83□□□□□ -1.64
LINC01416-201ENST00000563553 FOXP3Q9BZS1 431 aa4.83□□□□□ -1.64
LINC01416-201ENST00000563553 CWC22Q9HCG8 908 aaKnown RBP4.83□□□□□ -1.64
LINC01416-201ENST00000563553 VPS8Q8N3P4 1428 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 CEP164Q9UPV0 1460 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 MEIS3P2A8K0S8 358 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 PRAMEF1O95521 474 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 GBP1P32455 592 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 CTSKP43235 329 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 ANKS4BQ8N8V4 417 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 GIPC2Q8TF65 315 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 HHIPL1Q96JK4 782 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 SLC26A8Q96RN1 970 aa4.82□□□□□ -1.64
LINC01416-201ENST00000563553 ZNF552Q9H707 407 aaPredicted RBP4.82□□□□□ -1.64
LINC01416-201ENST00000563553 CCER2I3L3R5 266 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 RAG1P15918 1043 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 SEZ6Q53EL9 994 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 NLRC3Q7RTR2 1065 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 EAF1Q96JC9 268 aaPredicted RBP4.81□□□□□ -1.64
LINC01416-201ENST00000563553 MAP6Q96JE9 813 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 PLCD4Q9BRC7 762 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 BCL2L13Q9BXK5 485 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 PRDM14Q9GZV8 571 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.81□□□□□ -1.64
LINC01416-201ENST00000563553 SLC6A17Q9H1V8 727 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 GPR160Q9UJ42 338 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 SCRIBQ14160 1630 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 TOP2AP11388 1531 aaKnown RBP4.81□□□□□ -1.64
LINC01416-201ENST00000563553 ADAMTS20P59510 1910 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 NACADO15069 1562 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 DHX57Q6P158 1386 aaKnown RBP4.81□□□□□ -1.64
LINC01416-201ENST00000563553 SHOXO15266 292 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 TMEM253P0C7T8 217 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 ACRP10323 421 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 DLG4P78352 724 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 KIR3DS1Q14943 382 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 RNF111Q6ZNA4 994 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 TTLL10Q6ZVT0 673 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 ZNF605Q86T29 641 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 SLITRK4Q8IW52 837 aa4.81□□□□□ -1.64
LINC01416-201ENST00000563553 REXO1Q8N1G1 1221 aaKnown RBP4.81□□□□□ -1.64
LINC01416-201ENST00000563553 LINC00116Q8NCU8 138 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms