RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 TMED8Q6PL24 325 aaPredicted RBP12.27□□□□□ -0.45
SNX29-202ENST00000563308 GPR142Q7Z601 462 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 PRSS33Q8NF86 280 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 ATOH1Q92858 354 aaPredicted RBP12.27□□□□□ -0.45
SNX29-202ENST00000563308 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 BAHCC1Q9P281 2608 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 LOC285556D6RIA3 1793 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 TCRBV5S4A2TA0A5A2 114 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 HMMRO75330 724 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 GDF11O95390 407 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 ASNSP08243 561 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 PDE6AP16499 860 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 BACE1P56817 501 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 MTMR2Q13614 643 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 TATDN1Q6P1N9 297 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 CLASRPQ8N2M8 674 aaKnown RBP12.26□□□□□ -0.45
SNX29-202ENST00000563308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNX29-202ENST00000563308 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
SNX29-202ENST00000563308 ZBTB21Q9ULJ3 1066 aa12.26□□□□□ -0.45
SNX29-202ENST00000563308 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 KCTD2Q14681 263 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 MORN1Q5T089 497 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 RASIP1Q5U651 963 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 CERS3Q8IU89 383 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 SUGP1Q8IWZ8 645 aaKnown RBP12.25□□□□□ -0.45
SNX29-202ENST00000563308 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
SNX29-202ENST00000563308 USP6NLQ92738 828 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 EHD4Q9H223 541 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 AS3MTQ9HBK9 375 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 GINM1Q9NU53 330 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 YBX2Q9Y2T7 364 aaKnown RBP12.25□□□□□ -0.45
SNX29-202ENST00000563308 IVNS1ABPQ9Y6Y0 642 aa12.25□□□□□ -0.45
SNX29-202ENST00000563308 PRRC2BQ5JSZ5 2229 aaKnown RBP12.25□□□□□ -0.45
SNX29-202ENST00000563308 PTPRZ1P23471 2315 aaPredicted RBP12.25□□□□□ -0.45
SNX29-202ENST00000563308 A0A0G2JMZ2 1700 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 GOLIM4O00461 696 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 PEX10O60683 326 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 HLA-DOAP06340 250 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 IFIT2P09913 472 aaKnown RBP12.24□□□□□ -0.45
SNX29-202ENST00000563308 HOXA7P31268 230 aaPredicted RBP12.24□□□□□ -0.45
SNX29-202ENST00000563308 USP5P45974 858 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 PLCD1P51178 756 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 CCNA1P78396 465 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 EVX2Q03828 476 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 TTF1Q15361 905 aaPredicted RBP12.24□□□□□ -0.45
SNX29-202ENST00000563308 SLC9C2Q5TAH2 1124 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 GTF3C2Q8WUA4 911 aaPredicted RBP12.24□□□□□ -0.45
SNX29-202ENST00000563308 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 FAM86C1Q9NVL1 165 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 SERPINB13Q9UIV8 391 aa12.24□□□□□ -0.45
SNX29-202ENST00000563308 XIRP2A4UGR9 3374 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 ZNF536O15090 1300 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 ZNF532Q9HCE3 1301 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 C19orf81C9J6K1 198 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 USP17L10C9JJH3 530 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 GH2P01242 217 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 FGBP02675 491 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 CHGBP05060 677 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 ACRP10323 421 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 ATP5JP18859 108 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 CYP2C19P33261 490 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 SHMT1P34896 483 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 GABPAQ06546 454 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 LRRC41Q15345 812 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 RNF180Q86T96 592 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 TOX2Q96NM4 488 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
SNX29-202ENST00000563308 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 TXNRD2Q9NNW7 524 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 TMOD4Q9NZQ9 345 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 FAM50BQ9Y247 325 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 PCDHA11Q9Y5I1 949 aa12.23□□□□□ -0.45
SNX29-202ENST00000563308 ZFHX2Q9C0A1 2572 aaPredicted RBP12.23□□□□□ -0.45
SNX29-202ENST00000563308 CFAP54Q96N23 3096 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 ZNF318Q5VUA4 2279 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 RFXAPO00287 272 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 SEPT4O43236 478 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 CSF2RAP15509 400 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 ERVK-24P63145 666 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 PUS10Q3MIT2 529 aaKnown RBP12.22□□□□□ -0.45
SNX29-202ENST00000563308 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 HAUS7Q99871 368 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 TRIM34Q9BYJ4 488 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 BOLA2Q9H3K6 86 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
SNX29-202ENST00000563308 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 PHF24Q9UPV7 400 aa12.22□□□□□ -0.45
SNX29-202ENST00000563308 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
SNX29-202ENST00000563308 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.45
SNX29-202ENST00000563308 RABGGTBP53611 331 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms