RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 DHX38Q92620 1227 aaKnown RBP7.01□□□□□ -1.29
NAE1-211ENST00000563253 TCTN2Q96GX1 697 aa7.01□□□□□ -1.29
NAE1-211ENST00000563253 TM9SF2Q99805 663 aa7.01□□□□□ -1.29
NAE1-211ENST00000563253 MKRN2Q9H000 416 aaKnown RBP7.01□□□□□ -1.29
NAE1-211ENST00000563253 SIGLEC6O43699 453 aa7□□□□□ -1.29
NAE1-211ENST00000563253 PRAMEF1O95521 474 aa7□□□□□ -1.29
NAE1-211ENST00000563253 COL9A2Q14055 689 aaPredicted RBP7□□□□□ -1.29
NAE1-211ENST00000563253 FBXW10Q5XX13 1052 aa7□□□□□ -1.29
NAE1-211ENST00000563253 RNF111Q6ZNA4 994 aa7□□□□□ -1.29
NAE1-211ENST00000563253 KRTAP1-3Q8IUG1 177 aa7□□□□□ -1.29
NAE1-211ENST00000563253 TAB3Q8N5C8 712 aaPredicted RBP7□□□□□ -1.29
NAE1-211ENST00000563253 ZNF655Q8N720 491 aaPredicted RBP7□□□□□ -1.29
NAE1-211ENST00000563253 RBBP8NLQ8NC74 664 aaPredicted RBP7□□□□□ -1.29
NAE1-211ENST00000563253 DHRS1Q96LJ7 313 aa7□□□□□ -1.29
NAE1-211ENST00000563253 SPATA32Q96LK8 384 aa7□□□□□ -1.29
NAE1-211ENST00000563253 PRDM14Q9GZV8 571 aa7□□□□□ -1.29
NAE1-211ENST00000563253 SP110Q9HB58 689 aa7□□□□□ -1.29
NAE1-211ENST00000563253 SUCOQ9UBS9 1254 aaKnown RBP7□□□□□ -1.29
NAE1-211ENST00000563253 ZNF281Q9Y2X9 895 aa7□□□□□ -1.29
NAE1-211ENST00000563253 FAM86C2PA6NEL3 165 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 TRHRP34981 398 aaPredicted RBP6.99□□□□□ -1.29
NAE1-211ENST00000563253 MESP2Q0VG99 397 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 DUSP4Q13115 394 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 C9orf131Q5VYM1 1079 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 PRR23BQ6ZRT6 265 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 OXR1Q8N573 874 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 FOXP3Q9BZS1 431 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 GINM1Q9NU53 330 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 EBF1Q9UH73 591 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
NAE1-211ENST00000563253 FITM1A5D6W6 292 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
NAE1-211ENST00000563253 AUHQ13825 339 aaKnown RBP6.98□□□□□ -1.29
NAE1-211ENST00000563253 NR0B2Q15466 257 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 LSRQ86X29 649 aaPredicted RBP6.98□□□□□ -1.29
NAE1-211ENST00000563253 LILRA2Q8N149 483 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 LINC00116Q8NCU8 138 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 RASGRP4Q8TDF6 673 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 LINC01599Q8WXQ3 324 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 GPRASP2Q96D09 838 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 G6PC3Q9BUM1 346 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 C19orf44Q9H6X5 657 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 TCFL5Q9UL49 500 aa6.98□□□□□ -1.29
NAE1-211ENST00000563253 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.98□□□□□ -1.29
NAE1-211ENST00000563253 C9IYK1 514 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 GUCY2CP25092 1073 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 RPL10P27635 214 aaKnown RBP6.97□□□□□ -1.29
NAE1-211ENST00000563253 SOX9P48436 509 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
NAE1-211ENST00000563253 CHRNEQ04844 493 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 BBS9Q3SYG4 887 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 TIGD5Q53EQ6 642 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 CCDC81Q6ZN84 652 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 RUFY4Q6ZNE9 571 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 KSR1Q8IVT5 923 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 FAM84AQ96KN4 292 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 RNF32Q9H0A6 362 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 CHST7Q9NS84 486 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 GFOD1Q9NXC2 390 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 FBXL21Q9UKT6 434 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 EFR3BQ9Y2G0 817 aa6.97□□□□□ -1.29
NAE1-211ENST00000563253 SSU72P8A0A1W2PR75 194 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 TMEM82A0PJX8 343 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 SYPP08247 313 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 GJA8P48165 433 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 ZYXQ15942 572 aaKnown RBP6.96□□□□□ -1.3
NAE1-211ENST00000563253 WAPLQ7Z5K2 1190 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 SPPL2CQ8IUH8 684 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 CCDC144CPQ8IYA2 1237 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 C7orf61Q8IZ16 206 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 SLC38A3Q99624 504 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
NAE1-211ENST00000563253 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
NAE1-211ENST00000563253 SHOXO15266 292 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 FKTNO75072 461 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 ZNF124Q15973 351 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 TDRD10Q5VZ19 366 aaKnown RBP6.95□□□□□ -1.3
NAE1-211ENST00000563253 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 PPFIBP1Q86W92 1011 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 SMARCC1Q92922 1105 aaPredicted RBP6.95□□□□□ -1.3
NAE1-211ENST00000563253 DIRC2Q96SL1 478 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 TGIF2Q9GZN2 237 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
NAE1-211ENST00000563253 ZMYM5Q9UJ78 669 aa6.95□□□□□ -1.3
NAE1-211ENST00000563253 MEIS1O00470 390 aa6.94□□□□□ -1.3
NAE1-211ENST00000563253 CTSKP43235 329 aa6.94□□□□□ -1.3
NAE1-211ENST00000563253 PKN1Q16512 942 aa6.94□□□□□ -1.3
NAE1-211ENST00000563253 BHLHE22Q8NFJ8 381 aaPredicted RBP6.94□□□□□ -1.3
NAE1-211ENST00000563253 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
NAE1-211ENST00000563253 CRBNQ96SW2 442 aa6.94□□□□□ -1.3
NAE1-211ENST00000563253 CWC22Q9HCG8 908 aaKnown RBP6.94□□□□□ -1.3
NAE1-211ENST00000563253 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
NAE1-211ENST00000563253 BMP8BP34820 402 aa6.93□□□□□ -1.3
NAE1-211ENST00000563253 EIF6P56537 245 aaKnown RBP6.93□□□□□ -1.3
NAE1-211ENST00000563253 DCAF15Q66K64 600 aa6.93□□□□□ -1.3
NAE1-211ENST00000563253 ZPBP2Q6X784 338 aa6.93□□□□□ -1.3
NAE1-211ENST00000563253 FBXO15Q8NCQ5 510 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms