RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	DPP9	Q86TI2	863 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	FEZ1	Q99689	392 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	DBNDD2	Q9BQY9	259 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	SPATC1L	Q9H0A9	340 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	HOXC10	Q9NYD6	342 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	FPGT-TNNI3K	V9GXZ4	949 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	CLTB	P09497	229 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	HOXB3	P14651	431 aa	Predicted RBP	10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	ERCC3	P19447	782 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	ZAP70	P43403	619 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	RARS	P54136	660 aa	Known RBP	10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	RAB3GAP1	Q15042	981 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	CERKL	Q49MI3	558 aa	Predicted RBP	10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	FAM47A	Q5JRC9	791 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	RASIP1	Q5U651	963 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	WDR78	Q5VTH9	848 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	ANKRD33	Q7Z3H0	272 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	MB21D1	Q8N884	522 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	MAML3	Q96JK9	1138 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	RNPC3	Q96LT9	517 aa	Known RBP	10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	MROH8	Q9H579	483 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	XIRP2	A4UGR9	3374 aa		10.17	□□□□□ -0.78
CKLF-208	ENST00000563092	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	GNAI2	P04899	355 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	CYP7A1	P22680	504 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	DNAJB2	P25686	324 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	PLCD1	P51178	756 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	KIAA1755	Q5JYT7	1200 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	CCDC158	Q5M9N0	1113 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	TTC39A	Q5SRH9	613 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	PRAMEF19	Q5SWL8	479 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	ANO1	Q5XXA6	986 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	TTC6	Q86TZ1	520 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	SIAH1	Q8IUQ4	282 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	FERMT2	Q96AC1	680 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	TOX2	Q96NM4	488 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	RIOK1	Q9BRS2	568 aa	Known RBP	10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	ADAMTS5	Q9UNA0	930 aa		10.16	□□□□□ -0.78
CKLF-208	ENST00000563092	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	FPGS	Q05932	587 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	FAAP100	Q0VG06	881 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	SEPT2	Q15019	361 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	AKNAD1	Q5T1N1	836 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	SSH3	Q8TE77	659 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	ZNF576	Q9H609	170 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	CABP5	Q9NP86	173 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	XPNPEP3	Q9NQH7	507 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	SLC5A4	Q9NY91	659 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	DBNL	Q9UJU6	430 aa	Known RBP	10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	DIS3	Q9Y2L1	958 aa	Known RBP	10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	NOP58	Q9Y2X3	529 aa	Known RBP	10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	CHD7	Q9P2D1	2997 aa		10.15	□□□□□ -0.78
CKLF-208	ENST00000563092	MYH1	P12882	1939 aa		10.15	□□□□□ -0.79
CKLF-208	ENST00000563092		A0A1W2PQ45	241 aa	Predicted RBP	10.14	□□□□□ -0.79
CKLF-208	ENST00000563092		A0A1W2PQY0	241 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	ADAMTS4	O75173	837 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	TRIM27	P14373	513 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	RAG1	P15918	1043 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	USP5	P45974	858 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	ZNF792	Q3KQV3	632 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	C16orf59	Q7L2K0	433 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	EFCAB3	Q8N7B9	438 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	MIGA1	Q8NAN2	632 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	KLHDC9	Q8NEP7	349 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	TSEN34	Q9BSV6	310 aa	Known RBP	10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	TBX21	Q9UL17	535 aa		10.14	□□□□□ -0.79
CKLF-208	ENST00000563092	SLC25A27	O95847	323 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	PGK1	P00558	417 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	TIMP1	P01033	207 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	RARB	P10826	455 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	FCER1A	P12319	257 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	PLA2G5	P39877	138 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	CDK7	P50613	346 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	TMEM132B	Q14DG7	1078 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	RNF180	Q86T96	592 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	TIFA	Q96CG3	184 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	ASB2	Q96Q27	587 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	TINF2	Q9BSI4	451 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	TLR7	Q9NYK1	1049 aa	Known RBP	10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	TMX2	Q9Y320	296 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	REV3L	O60673	3130 aa		10.13	□□□□□ -0.79
CKLF-208	ENST00000563092	PARP14	Q460N5	1801 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	PQBP1	O60828	265 aa	Known RBP	10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	IDH1	O75874	414 aa	Known RBP	10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	TAL1	P17542	331 aa	Predicted RBP	10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	ACLY	P53396	1101 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	ATP8B2	P98198	1209 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	TMEM240	Q5SV17	173 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	MFSD5	Q6N075	450 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	RIOX2	Q8IUF8	465 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	MSL3	Q8N5Y2	521 aa	Known RBP	10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	MAGEB6	Q8N7X4	407 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	EAF2	Q96CJ1	260 aa	Predicted RBP	10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	ATG4C	Q96DT6	458 aa		10.12	□□□□□ -0.79

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