RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 XPO4Q9C0E2 1151 aaKnown RBP24.32■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 BARHL2Q9NY43 387 aa24.32■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 TTF2Q9UNY4 1162 aaKnown RBP24.32■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 CCDC194A0A1B0GVG4 234 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 KLRF2D3W0D1 207 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 MORC3Q14149 939 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 NOM1Q5C9Z4 860 aaKnown RBP24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 USP49Q70CQ1 688 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 GPKOWQ92917 476 aaPredicted RBP eCLIP24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PRIMPOLQ96LW4 560 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 VEGFAP15692 232 aaPredicted RBP24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 FANCCQ00597 558 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 WWC2Q6AWC2 1192 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 HHIPL2Q6UWX4 724 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 HEATR3Q7Z4Q2 680 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 SPATA20Q8TB22 786 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 DHX58Q96C10 678 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 EPSTI1Q96J88 318 aa24.31■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 VWA3AA6NCI4 1184 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 STXBP3O00186 592 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 WNT7AO00755 349 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PRR29P0C7W0 189 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 LMOD1P29536 600 aaPredicted RBP24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 FILIP1Q7Z7B0 1213 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 CEP95Q96GE4 821 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 SWAP70Q9UH65 585 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 MYO3BQ8WXR4 1341 aa24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 COL11A2P13942 1736 aaPredicted RBP24.3■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 CYTH3O43739 400 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 MCM7P33993 719 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 CERS5Q8N5B7 392 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 CCDC150Q8NCX0 1101 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 RRP36Q96EU6 259 aaKnown RBP24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 F8W031 263 aaPredicted RBP24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 M0R2N6 131 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 LONP1P36776 959 aaKnown RBP24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 GABPAQ06546 454 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PICALMQ13492 652 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 DOK7Q18PE1 504 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 SH3RF1Q7Z6J0 888 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 TEKT1Q969V4 418 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 USP40Q9NVE5 1235 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 MTMR7Q9Y216 660 aa24.29■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 BMP6P22004 513 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 SLC35G1Q2M3R5 365 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 STYK1Q6J9G0 422 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PODNQ7Z5L7 613 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 IQUBQ8NA54 791 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PAGE5Q96GU1 130 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 HSD3B7Q9H2F3 369 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 SEC63Q9UGP8 760 aaKnown RBP24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PCDHA6Q9UN73 950 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 PCDHA8Q9Y5H6 950 aa24.28■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 TXLNAP40222 546 aa24.27■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 ENOX1Q8TC92 643 aaKnown RBP24.27■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 ZNF622Q969S3 477 aaKnown RBP eCLIP24.27■■□□□ 1.48
VPS9D1-AS1-202ENST00000562866 SERPINC1P01008 464 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 C2CD5Q86YS7 1000 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 GRAMD1CQ8IYS0 662 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 C10orf71Q711Q0 1435 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 A0A087X0B3 334 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 H0YIN7 160 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 hCG_1984214I3L0E3 225 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 LAD1O00515 517 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 GOLGA8HP0CJ92 632 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ERCC5P28715 1186 aaPredicted RBP24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 GNA11P29992 359 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 UBASH3AP57075 661 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 FKBP1AP62942 108 aaKnown RBP24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 PPP4R3BQ5MIZ7 849 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 TYW1BQ6NUM6 668 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 TMC6Q7Z403 805 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ZNF713Q8N859 430 aaPredicted RBP24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 GSDMAQ96QA5 445 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ZMYND12Q9H0C1 365 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 C6orf50Q9HD87 102 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 MTMR4Q9NYA4 1195 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 SERPINB13Q9UIV8 391 aa24.26■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 RGPD3A6NKT7 1758 aaPredicted RBP24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 RGPD4Q7Z3J3 1758 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 NRDCO43847 1150 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 HLA-DOAP06340 250 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 SKILP12757 684 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 NAPAP54920 295 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ASPRV1Q53RT3 343 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 KRT25Q7Z3Z0 450 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 C4orf32Q8N8J7 132 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 MRIQ9BWK5 157 aa24.25■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 UQCRHLA0A096LP55 91 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 UQCRHP07919 91 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ATP1A3P13637 1013 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 SOGA3Q5TF21 947 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 FANCLQ9NW38 375 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 IGKV6D-41A0A0C4DH26 115 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 ADAMTS3O15072 1205 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 RXRBP28702 533 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 CDC42EP5Q6NZY7 148 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 USP17L2Q6R6M4 530 aa24.24■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 AFMP43652 599 aa24.23■■□□□ 1.47
VPS9D1-AS1-202ENST00000562866 DPYDQ12882 1025 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms